Escherichia coli STEC309 |
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Putative Escherichia coli STEC309 RM systems
Ref: Yang,X. et al. Int. J. Med. Microbiol. 310 (1), 151377 (2020)
REBASE ref # 29793
| Sequence length: | GenBank #: | |
| Chromosome: | 4,917,238 bp | CP041435 |
| plasmid pSTEC309: | 88,727 bp | CP041436 |
REBASE acronym: EcoC309
Org_num: 38086
All begin FNE81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20940 | IS3 family transposase | |||
| 20945 | M | M.SsoSE61ORF6540P (79% identity) | GACNNNNNNRTAAY | M.EcoC309ORF20945P |
| 20950 | S | S.EcoWP2ORF38380P (99% identity) | GACNNNNNNRTAAY | S.EcoC309ORF20945P |
| 20955 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | EcoC309ORF20945P |
| 20965 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC309DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 domain-containing protein | |||
| 2315 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC309ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 9345 | phosphohydrolase | |||
| 9350 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC309DcmP |
| 9355 | V | V.SsoSE61DcmP (100% identity) | V.EcoC309DcmP | |
| 9360 | drug/metabolite exporter YedA | |||
| 15410 | replication endonuclease | |||
| 15415 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.EcoC309ORF15415P |
| 15420 | TraR/DksA family transcriptional regulator | |||
| 16080 | NinE family protein | |||
| 16085 | M | M.Efe1521ORF4420P (99% identity) | GATC | M.EcoC309ORF16085P |
| 16090 | recombination protein NinB | |||
| 17495 | DUF1317 family protein | |||
| 17500 | M | M.Eco14723ORF6580P (100% identity) | M.EcoC309ORF17500P | |
| 17505 | 93 aa hypothetical protein | |||
| 18970 | LexA family transcriptional regulator | |||
| 18975 | M | M.EcoK12PORFFP (100% identity) | GATC | M.EcoC309ORF18975P |
| 18980 | PerC family transcriptional regulator | |||
| 22350 | LexA family transcriptional regulator | |||
| 22355 | M | M.EcoEC0362ORF5955P (93% identity) | M.EcoC309ORF22355P | |
| 22360 | PerC family transcriptional regulator | |||
| plasmid pSTEC309 | ||||
| 24655 | 73 aa hypothetical protein | |||
| 24660 | M | M.EcoWY5172ORF23370P (100% identity) | M.EcoC309ORF24660P | |
| 24665 | 102 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 310 | DNA damage-inducible protein D | |||
| 315 | R | EcoY2019ORF14655P (100% identity) | EcoC309ORF320P | |
| 320 | M | M.EcoY2019ORF14655P (100% identity) | M.EcoC309ORF320P | |
| 325 | DUF262 domain-containing protein | |||