Escherichia coli STEC005 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli STEC005 RM systems
Ref: Yang,X. et al. Int. J. Med. Microbiol. 310 (1), 151377 (2020)
REBASE ref # 29793
| Sequence length: | GenBank #: | |
| Chromosome: | 4,937,832 bp | CP041437 |
| plasmid pSTEC005: | 89,435 bp | CP041438 |
REBASE acronym: Eco005
Org_num: 38085
All begin FNE80_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1760 | cell division protein DamX | |||
| 1765 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco005DamP |
| 1770 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 domain-containing protein | |||
| 2320 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.Eco005ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 4140 | 500 aa hypothetical protein | |||
| 4145 | M | M.EcoSTEC413ORF4250P (100% identity) | M.Eco005ORF4145P | |
| 4150 | ISL3 family transposase | |||
| 4150 | ISL3 family transposase | |||
| 4155 | R | EcoSTEC413ORF4260P (100% identity) | GAAC | Eco005ORF4155P |
| 4160 | integrase | |||
| 9090 | phosphohydrolase | |||
| 9095 | M | M.SflSTLE1DcmP (99% identity) | CCWGG | M.Eco005DcmP |
| 9100 | V | V.SsoSE61DcmP (100% identity) | V.Eco005DcmP | |
| 9105 | drug/metabolite exporter YedA | |||
| 13450 | tellurite/colicin resistance protein | |||
| 13465 | M | M.EcoSTEC1025ORF10405P (100% identity) | M.Eco005ORF13465P | |
| 13470 | TrmB family transcriptional regulator | |||
| 16075 | replication endonuclease | |||
| 16080 | M | M.Eco0116ORF15425P (100% identity) | GATC | M.Eco005ORF16080P |
| 16085 | TraR/DksA family transcriptional regulator | |||
| 19175 | 136 aa hypothetical protein | |||
| 19180 | RM | Efe253ORF549P (100% identity) | Eco005ORF19180P | |
| 19185 | DUF262 domain-containing protein | |||
| 19390 | LexA family transcriptional regulator | |||
| 19395 | M | M.EcoS30ORF19345P (100% identity) | GATC | M.Eco005ORF19395P |
| 19400 | PerC family transcriptional regulator | |||
| 21290 | HNH endonuclease | |||
| 21295 | R | EcoSTEC384ORFHP (96% identity) | Eco005ORF21295P | |
| 21300 | DNA cytosine methyltransferase | |||
| 21295 | HNH endonuclease | |||
| 21300 | M | M.EcoXH993ORF23960P (100% identity) | M.Eco005ORF21300P | |
| 21305 | R | R2.EcoXH993ORF23960P (98% identity) | Eco005ORF21300P | |
| 21310 | transposase | |||
| plasmid pSTEC005 | ||||
| 24430 | 102 aa hypothetical protein | |||
| 24435 | M | M.EcoWY5172ORF23370P (100% identity) | M.Eco005ORF24435P | |
| 24440 | 73 aa hypothetical protein | |||