Clostridioides difficile 20922 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridioides difficile 20922 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,135,554 bp
GenBank #: PZQZ00000000 (NZ_PZQZ00000000)
REBASE acronym: Cdi20922
Org_num: 36166
All begin DA416_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15800 | DUF262 domain-containing protein | |||
| 15805 | R | CdiCd23ORF15855P (100% identity) | GAANNNNNNCTG | Cdi20922ORF15825P |
| 15810 | 142 aa hypothetical protein | |||
| 15815 | nucleotidyltransferase domain-containing | |||
| 15820 | S | S.CdiEW50II (100% identity) | GAANNNNNNCTG | S.Cdi20922ORF15825P |
| 15825 | M | M.PdiZ31ORF1268P (100% identity) | GAANNNNNNCTG | M.Cdi20922ORF15825P |
| 15830 | ketose-bisphosphate aldolase | |||
| 16350 | 111 aa hypothetical protein | |||
| 16355 | R | CdiS0942ORF16230P (100% identity) | AYGNNNNNNCTG | Cdi20922ORF16380P |
| 16360 | 300 aa hypothetical protein | |||
| 16365 | 106 aa hypothetical protein | |||
| 16370 | 150 aa hypothetical protein | |||
| 16375 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.Cdi20922ORF16380P |
| 16380 | M | M.CdiRSS2ORF3900P (100% identity) | AYGNNNNNNCTG | M.Cdi20922ORF16380P |
| 16385 | 81 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2620 | 96 aa hypothetical protein | |||
| 2625 | M | M.CdiEW50IV (100% identity) | CTGCAG | M.Cdi20922ORF2625P |
| 2630 | R | CdiEW50IVP (100% identity) | CTGCAG | Cdi20922ORF2625P |
| 2635 | 178 aa hypothetical protein | |||
| 14555 | patatin-like phospholipase family protein | |||
| 14560 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20922ORF14560P |
| 14565 | Rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11080 | AAA family ATPase | |||
| 11085 | R | Cdo002McrCP (100% identity) | Cdi20922McrCP | |
| 11090 | R | Pdi6602McrBP (100% identity) | Cdi20922McrBP | |
| 11095 | cell division protein | |||