Escherichia coli P59A |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli P59A RM systems
Ref: Nadimpalli,M. unpublished
REBASE ref # 29295
| Sequence length: | GenBank #: | |
| Chromosome: | 4,678,881 bp | CP044298 |
| plasmid pP59A-2: | 116,995 bp | CP044300 |
| plasmid pP59A-CTX-M-55: | 253,160 bp | CP044299 |
REBASE acronym: EcoP59A
Org_num: 36796
All begin F6P93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6255 | 378 aa hypothetical protein | |||
| 6260 | M | M.Ero309ORF14810P (71% identity) | M.EcoP59AORF6260P | |
| 6265 | S | S.EcoS43ORF18655P (64% identity) | S.EcoP59AORF6260P | |
| 6270 | YecA family protein | |||
| 6275 | R | Eco65TORF11860P (88% identity) | EcoP59AORF6260P | |
| 6280 | 74 aa hypothetical protein | |||
| 16195 | restriction endonuclease | |||
| 16200 | M | M.Esp9308ORFIP (100% identity) | CGTANNNNNGTC | M.EcoP59AORF16200P |
| 16205 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.EcoP59AORF16200P |
| 16210 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | EcoP59AORF16200P |
| 16215 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5925 | phosphohydrolase | |||
| 5930 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoP59ADcmP |
| 5935 | V | V.SsoSE61DcmP (100% identity) | V.EcoP59ADcmP | |
| 5940 | drug/metabolite exporter YedA | |||
| 12100 | NinE family protein | |||
| 12105 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoP59AORF12105P |
| 12110 | recombination protein NinB | |||
| 21170 | cell division protein DamX | |||
| 21175 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoP59ADamP |
| 21180 | ribulose-phosphate 3-epimerase | |||
| 21805 | DUF2556 domain-containing protein | |||
| 21810 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoP59AORF21810P |
| 21815 | DNA-binding transcriptional regulator Fis | |||
| plasmid pP59A-2 | ||||
| 23985 | 318 aa hypothetical protein | |||
| 23990 | M | M.SphSSU5ORF88P (96% identity) | M.EcoP59AORF23990P | |
| 23995 | 76 aa hypothetical protein | |||
| 24530 | type III restriction endonuclease subunit M | |||
| 24535 | M | M.EcoP59AORF24530P (66% identity) | M.EcoP59AORF24535P | |
| 24540 | DUF4391 domain-containing protein | |||
| plasmid pP59A-CTX-M-55 | ||||
| 22390 | DNA-binding protein | |||
| 22395 | M | M.Ype21801ORF197P (100% identity) | M.EcoP59AORF22395P | |
| 22400 | 273 aa hypothetical protein | |||
| 22955 | 56 aa hypothetical protein | |||
| ??? | M | M.Sens770ORF21675P (100% identity) | M.EcoP59AORF22960P | |
| 22965 | thermonuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pP59A-2 | ||||
| 24520 | recombinase RecA | |||
| 24525 | R | EcoHS301ORF23870P (99% identity) | EcoP59AORF24530P | |
| ??? | M | M.EcoP59AORF24535P (66% identity) | M.EcoP59AORF24530P | |
| 24540 | DUF4391 domain-containing protein | |||