Escherichia coli RM19259 |
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Putative Escherichia coli RM19259 RM systems
Ref: Zhang,Y. et al. unpublished
REBASE ref # 29336
| Sequence length: | GenBank #: | |
| Chromosome: | 5,511,015 bp | CP046527 |
| plasmid pRM19259: | 98,304 bp | CP046526 |
REBASE acronym: Eco19259
Org_num: 36804
All begin GN312_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12890 | endoribonuclease SymE | |||
| 12895 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco19259ORFAP |
| 12900 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco19259ORFAP |
| 12905 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco19259ORFAP |
| 12910 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2125 | NinE family protein | |||
| 2130 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco19259ORF2130P |
| 2135 | endonuclease | |||
| 2300 | 55 aa hypothetical protein | |||
| 2305 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco19259ORF2305P |
| 2310 | DUF1382 family protein | |||
| 6950 | DNA-binding transcriptional regulator Fis | |||
| 6955 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco19259ORF6955P |
| 6960 | DUF2556 domain-containing protein | |||
| 7485 | ribulose-phosphate 3-epimerase | |||
| 7490 | M | adenine-specific DNA-methyltransferase | GATC | M.Eco19259DamP |
| 7495 | cell division protein DamX | |||
| 11400 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco19259ORF11405P | |
| 11410 | Eae protein | |||
| 12630 | transposase | |||
| 12635 | R | EcosPA8ORF17350P (100% identity) | Eco19259ORF12635P | |
| 12640 | N-acetylneuraminate epimerase | |||
| 12670 | DEAD/DEAH box helicase | |||
| 12675 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco19259ORF12675P |
| 21510 | TrmB family transcriptional regulator | |||
| 21515 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco19259ORF21515P | |
| 21530 | DUF1737 domain-containing protein | |||
| 25955 | drug/metabolite exporter YedA | |||
| 25960 | V | V.EcosPA8DcmP (100% identity) | V.Eco19259DcmP | |
| 25965 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco19259DcmP |
| 25970 | phosphohydrolase | |||
| 26770 | NinE family protein | |||
| 26775 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco19259ORF26775P |
| 26780 | recombination protein NinB | |||
| plasmid pRM19259 | ||||
| 125 | 101 aa hypothetical protein | |||
| 130 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco19259ORF130P | |
| 135 | 73 aa hypothetical protein | |||