Escherichia coli AQ15 |
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Putative Escherichia coli AQ15 RM systems
Ref: Shi,A. et al. Biotechnol. Bioeng. (2019) In press
REBASE ref # 29288
Complete sequence: 4,753,097 bp
GenBank #: CP043487
REBASE acronym: EcoAQ15
Org_num: 36667
All begin FQT78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22630 | 582 aa hypothetical protein | |||
| 22635 | S | S.EcohubtORF20055P (98% identity) | AACNNNNNNGTGC | S.EcoAQ15ORF22640P |
| 22640 | M | M.EcohubtORF20055P (100% identity) | AACNNNNNNGTGC | M.EcoAQ15ORF22640P |
| 22645 | R | EcohubtORF20055P (100% identity) | AACNNNNNNGTGC | EcoAQ15ORF22640P |
| 22650 | WYL domain-containing protein | |||
| 22750 | 428 aa hypothetical protein | |||
| 22755 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.EcoAQ15ORF22760P |
| 22760 | M | M.EcoSL112ORF22880P (100% identity) | TGANNNNNNTCCA | M.EcoAQ15ORF22760P |
| 22765 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10490 | drug/metabolite exporter YedA | |||
| 10495 | V | V.SsoSE61DcmP (100% identity) | V.EcoAQ15DcmP | |
| 10500 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoAQ15DcmP |
| 10505 | phosphohydrolase | |||
| 17120 | DNA-binding transcriptional regulator Fis | |||
| 17125 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoAQ15ORF17125P |
| 17130 | DUF2556 domain-containing protein | |||
| 17675 | ribulose-phosphate 3-epimerase | |||
| 17680 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoAQ15DamP |
| 17685 | cell division protein DamX | |||
| 20750 | 68 aa hypothetical protein | |||
| 20755 | M | M.EcosE2ORF21575P (100% identity) | M.EcoAQ15ORF20755P | |
| 20760 | 345 aa hypothetical protein | |||
| 22610 | DUF4102 domain-containing protein | |||
| 22615 | R | EcohubtORF20080P (100% identity) | GAAC | EcoAQ15ORF22615P |
| 22620 | 5-nucleotidase | |||
| 22775 | AAA domain-containing protein | |||
| 22780 | R | EcohubtORF19915P (100% identity) | EcoAQ15ORF22780P | |
| 22785 | HNH endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22765 | 128 aa hypothetical protein | |||
| 22770 | R | EcohubtMcrCP (100% identity) | EcoAQ15McrCP | |
| 22775 | R | SflN101McrBP (100% identity) | EcoAQ15McrBP | |
| 22780 | HNH endonuclease | |||