Escherichia coli O157:H7 TT12B |
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Putative Escherichia coli O157:H7 TT12B RM systems
Ref: Allue-Guardia,A. et al. unpublished
REBASE ref # 29328
| Sequence length: | GenBank #: | |
| Chromosome: | 5,335,866 bp | CP038494 |
| plasmid pO157: | 92,707 bp | CP038495 |
REBASE acronym: EcoTT12B
Org_num: 36771
All begin E5F07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3100 | endoribonuclease SymE | |||
| 3105 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoTT12BORF3110P |
| 3110 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoTT12BORF3110P |
| 3115 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoTT12BORF3110P |
| 3120 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2835 | transposase | |||
| 2840 | R | Ecos1613ORF26795P (100% identity) | EcoTT12BORF2840P | |
| 2845 | N-acetylneuraminate epimerase | |||
| 2875 | DEAD/DEAH box helicase | |||
| 2880 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoTT12BORF2880P |
| 11760 | TrmB family transcriptional regulator | |||
| 11765 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoTT12BORF11765P | |
| 11780 | 61 aa hypothetical protein | |||
| 13365 | 329 aa hypothetical protein | |||
| 13370 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoTT12BORF13370P | |
| 13375 | 81 aa hypothetical protein | |||
| 16545 | drug/metabolite exporter YedA | |||
| 16550 | V | V.EcosPA8DcmP (100% identity) | V.EcoTT12BDcmP | |
| 16555 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoTT12BDcmP |
| 16560 | phosphohydrolase | |||
| 19875 | PerC family transcriptional regulator | |||
| 19880 | M | M.EcoTT12AORF21155P (100% identity) | M.EcoTT12BORF19880P | |
| 19885 | DUF1382 family protein | |||
| 23890 | DNA-binding transcriptional regulator Fis | |||
| 23895 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoTT12BORF23895P |
| 23900 | DUF2556 domain-containing protein | |||
| 24420 | ribulose-phosphate 3-epimerase | |||
| 24425 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTT12BDamP |
| 24430 | cell division protein DamX | |||
| plasmid pO157 | ||||
| 27115 | 59 aa hypothetical protein | |||
| 27120 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoTT12BORF27120P | |
| 27125 | 73 aa hypothetical protein | |||