Escherichia coli ERL04-3476 |
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Putative Escherichia coli ERL04-3476 RM systems
Ref: Bono,J.L. and On,S.L.W. unpublished
REBASE ref # 29307
| Sequence length: | GenBank #: | |
| Chromosome: | 5,573,120 bp | CP032808 |
| plasmid pERL04-3476-1: | 92,771 bp | CP032809 |
| plasmid pERL04-3476-2: | 61,441 bp | CP032810 |
REBASE acronym: Eco43476
Org_num: 36710
All begin D8Z68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25595 | DUF262 domain-containing protein | |||
| 25600 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco43476ORF25605P |
| 25605 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco43476ORF25605P |
| 25610 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco43476ORF25605P |
| 25615 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2410 | cell division protein DamX | |||
| 2415 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco43476DamP |
| 2420 | ribulose-phosphate 3-epimerase | |||
| 2950 | DUF2556 domain-containing protein | |||
| 2955 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco43476ORF2955P |
| 2960 | Fis family transcriptional regulator | |||
| 7790 | DUF1382 family protein | |||
| 7795 | M | M.EcoDV42ORF9740P (100% identity) | M.Eco43476ORF7795P | |
| 7800 | transposase domain-containing protein | |||
| 10670 | recombination protein NinB | |||
| 10675 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco43476ORF10675P |
| 10680 | NinE family protein | |||
| 11600 | phosphohydrolase | |||
| 11605 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco43476DcmP |
| 11610 | V | V.EcosPA8DcmP (100% identity) | V.Eco43476DcmP | |
| 11615 | drug/metabolite exporter YedA | |||
| 15290 | lipoprotein | |||
| 15295 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco43476ORF15295P | |
| 15310 | 61 aa hypothetical protein | |||
| 25860 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco43476ORF25860P |
| 25865 | DEAD/DEAH box helicase | |||
| 25895 | N-acetylneuraminate epimerase | |||
| 25900 | R | Ecos1613ORF26795P (100% identity) | Eco43476ORF25900P | |
| 25905 | transposase | |||
| plasmid pERL04-3476-1 | ||||
| 29250 | 101 aa hypothetical protein | |||
| 29255 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco43476ORF29255P | |
| 29260 | 73 aa hypothetical protein | |||
| plasmid pERL04-3476-2 | ||||
| 29565 | 59 aa hypothetical protein | |||
| 29570 | M | M.Xca80ORFEP (100% identity) | M.Eco43476ORF29570P | |
| 29575 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7955 | recombination protein NinB | |||
| 7960 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco43476ORF7960P |
| 7965 | NinE family protein | |||