Escherichia coli ERL05-0623 |
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Putative Escherichia coli ERL05-0623 RM systems
Ref: Bono,J.L. and On,S.L.W. unpublished
REBASE ref # 29307
| Sequence length: | GenBank #: | |
| Chromosome: | 5,390,258 bp | CP032805 |
| plasmid pERL05-0623-1: | 92,785 bp | CP032806 |
REBASE acronym: Eco0623
Org_num: 36711
All begin D8Z69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24530 | DUF262 domain-containing protein | |||
| 24535 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco0623ORF24540P |
| 24540 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco0623ORF24540P |
| 24545 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco0623ORF24540P |
| 24550 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2415 | protein DamX | |||
| 2420 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0623DamP |
| 2425 | ribulose-phosphate 3-epimerase | |||
| 2955 | DUF2556 domain-containing protein | |||
| 2960 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco0623ORF2960P |
| 2965 | Fis family transcriptional regulator | |||
| 9065 | recombination protein NinB | |||
| 9070 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco0623ORF9070P |
| 9075 | NinE family protein | |||
| 10575 | phosphohydrolase | |||
| 10580 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco0623DcmP |
| 10585 | V | V.EcosPA8DcmP (100% identity) | V.Eco0623DcmP | |
| 10590 | drug/metabolite exporter YedA | |||
| 14025 | 329 aa hypothetical protein | |||
| 14030 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco0623ORF14030P | |
| 14035 | 81 aa hypothetical protein | |||
| 14905 | 61 aa hypothetical protein | |||
| 14920 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco0623ORF14920P | |
| 14925 | lipoprotein | |||
| 17995 | NinE family protein | |||
| 18000 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco0623ORFAP |
| 18005 | recombination protein NinB | |||
| 24795 | RM | EcoOS292II (100% identity) | GAAABCC | Eco0623ORF24795P |
| 24800 | DEAD/DEAH box helicase | |||
| 24830 | N-acetylneuraminate epimerase | |||
| 24835 | R | Ecos1613ORF26795P (100% identity) | Eco0623ORF24835P | |
| 24840 | transposase | |||
| plasmid pERL05-0623-1 | ||||
| 28085 | 59 aa hypothetical protein | |||
| 28090 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco0623ORF28090P | |
| 28095 | 73 aa hypothetical protein | |||