Escherichia coli PK6 |
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Putative Escherichia coli PK6 RM systems
Ref: Hernandez-Fillor,R.E. et al. unpublished
REBASE ref # 29331
| Sequence length: | GenBank #: | |
| Chromosome: | 4,726,527 bp | CP042588 |
| plasmid pRHEcCUB-1: | 42,683 bp | CP042589 |
REBASE acronym: EcoPK6
Org_num: 36797
All begin FTO72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9820 | cold-shock protein | |||
| 9825 | R | EhoEh60ORF13695P (100% identity) | EcoPK6ORF9825P | |
| 9830 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPK6DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2380 | DUF2556 domain-containing protein | |||
| 2385 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoPK6ORF2385P |
| 2390 | DNA-binding transcriptional regulator Fis | |||
| 6225 | serine/threonine protein phosphatase | |||
| 6230 | M | M.EcoZ151ORF6750P (100% identity) | M.EcoPK6ORF6230P | |
| 6235 | PerC family transcriptional regulator | |||
| 7295 | recombination protein NinB | |||
| 7300 | M | M.SflN97ORF15810P (99% identity) | GATC | M.EcoPK6ORF7300P |
| 7305 | NinE family protein | |||
| 9460 | phosphohydrolase | |||
| 9465 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoPK6DcmP |
| 9470 | V | V.EcosEC7DcmP (100% identity) | V.EcoPK6DcmP | |
| 9475 | drug/metabolite exporter YedA | |||
| 11560 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoPK6ORFAP | |
| 11570 | 59 aa hypothetical protein | |||
| 19730 | phage lysis protein EssD | |||
| 19735 | M | M.Sso63633ORF22290P (100% identity) | M.EcoPK6ORF19735P | |
| 19740 | 67 aa hypothetical protein | |||
| 19765 | LexA family transcriptional regulator | |||
| 19770 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoPK6ORF19770P |
| 19775 | PerC family transcriptional regulator | |||
| plasmid pRHEcCUB-1 | ||||
| 23320 | IS1 family transposase | |||
| 23325 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.EcoPK6ORF23325P |
| 23330 | R | EcoPK5ORF22335P (100% identity) | CCWGG | EcoPK6ORF23325BP |
| 23335 | IS1380-like element ISEc9 family transposase | |||
| 23340 | IS5-like element ISKpn26 family transposase | |||
| 23345 | class A extended-spectrum beta-lactamase | |||
| 23350 | cupin fold metalloprotein, WbuC family | |||
| 23355 | R | YpsR2ORFAP (49% identity) | CCWGG | EcoPK6ORF23325AP |
| 23360 | recombinase family protein | |||