Escherichia coli O145:H28 10942 |
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Putative Escherichia coli O145:H28 10942 RM systems
Ref: Nakamura,K. et al. unpublished
REBASE ref # 29325
| Sequence length: | GenBank #: | |
| Chromosome: | 5,374,674 bp | AP019703 |
| plasmid pO145_10942_1: | 92,337 bp | AP019704 |
| plasmid pO145_10942_2: | 71,161 bp | AP019705 |
REBASE acronym: Eco10942
Org_num: 36761
All begin EC10942_, EC10942_p1-, EC10942_p2-
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2420 | metal-dependent hydrolase | |||
| 2421 | R | EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | Eco10942ORF2425P |
| 2422 | 620 aa hypothetical protein | |||
| 2423 | SEC-C family protein | |||
| 2424 | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.Eco10942ORF2425P |
| 2425 | M | M.Eco122715ORF2280P (100% identity) | GATGNNNNNNTAC | M.Eco10942ORF2425P |
| 2426 | IS629 transposase OrfA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 746 | NinB family protein | |||
| 747 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco10942ORF747P |
| 748 | NinE protein | |||
| 1534 | 65 aa hypothetical protein | |||
| 1535 | M | M.EcoE115ORF1522P (100% identity) | M.Eco10942ORF1535P | |
| 1536 | Shiga toxin 2 subunit A | |||
| 2478 | amino acid exporter for phenylalanine | |||
| 2479 | V | V.SsoSE61DcmP (100% identity) | V.Eco10942DcmP | |
| 2480 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco10942DcmP |
| 2481 | HD superfamily phosphohydrolase | |||
| 3845 | global DNA-binding transcriptional dual | |||
| 3846 | M | M.EcoE115ORF4007P (100% identity) | ATGCAT | M.Eco10942ORF3846P |
| 3847 | uncharacterized protein YhdU | |||
| 3944 | D-ribulose-5-phosphate 3-epimerase | |||
| 3945 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10942DamP |
| 3946 | cell division protein DamX | |||
| 4549 | 77 aa hypothetical protein | |||
| 4550 | M | M.SflFF35ORF20P (100% identity) | M.Eco10942ORF4550P | |
| 4551 | 330 aa hypothetical protein | |||
| 4943 | 678 aa hypothetical protein | |||
| 4944 | R | Eco3084ORFIP (88% identity) | Eco10942ORF4944P | |
| 4945 | N-acetylneuraminate epimerase | |||
| 4951 | ATP-dependent helicase | |||
| 4952 | RM | EcoE115ORF5155P (100% identity) | Eco10942ORF4952P | |
| plasmid pO145_10942_1 | ||||
| 49 | DUF1281 family protein | |||
| 50 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco10942ORF50P |
| 51 | 73 aa hypothetical protein | |||
| plasmid pO145_10942_2 | ||||
| 20 | 103 aa hypothetical protein | |||
| 21 | M | M.Ecos69ORF26765P (100% identity) | M.Eco10942ORF21P | |
| 22 | 73 aa hypothetical protein | |||