Escherichia coli O157 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157 RM systems
Ref: Al Ajmi,D. and Rahman,S. unpublished
REBASE ref # 29326
Complete sequence: 5,444,610 bp
GenBank #: CP043539
REBASE acronym: EcoA1Ain
Org_num: 36764
All begin F0L19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12715 | DUF262 domain-containing protein | |||
| 12720 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoA1AinORF12725P |
| 12725 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoA1AinORF12725P |
| 12730 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoA1AinORF12725P |
| 12735 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3810 | 61 aa hypothetical protein | |||
| 3825 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoA1AinORF3825P | |
| 3830 | TrmB family transcriptional regulator | |||
| 12950 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoA1AinORF12950P |
| 12955 | DEAD/DEAH box helicase | |||
| 12985 | N-acetylneuraminate epimerase | |||
| 12990 | R | Ecos1613ORF26795P (100% identity) | EcoA1AinORF12990P | |
| 12995 | transposase | |||
| 18200 | cell division protein DamX | |||
| 18205 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoA1AinDamP |
| 18210 | ribulose-phosphate 3-epimerase | |||
| 18730 | DUF2556 domain-containing protein | |||
| 18735 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoA1AinORF18735P |
| 18740 | DNA-binding transcriptional regulator Fis | |||
| 25835 | recombination protein NinB | |||
| 25840 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoA1AinORF25840P |
| 25845 | NinE family protein | |||
| 26725 | phosphohydrolase | |||
| 26730 | M | M.EcoMB411DcmP (100% identity) | CCWGG | M.EcoA1AinDcmP |
| 26735 | V | V.EcosPA8DcmP (100% identity) | V.EcoA1AinDcmP | |
| 26740 | drug/metabolite exporter YedA | |||