Escherichia coli O2:H6 PG20180057 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O2:H6 PG20180057 RM systems
Ref: Laskey,A. et al. unpublished
REBASE ref # 28958
Complete sequence: 5,044,633 bp
GenBank #: CP043181
REBASE acronym: Eco180057
Org_num: 36790
All begin FYA20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15545 | NADPH-dependent aldehyde reductase Ahr | |||
| 15555 | R | EcosA33IP (100% identity) | Eco180057ORF15565P | |
| 15560 | S | S.Eco906ORF2415P (100% identity) | S.Eco180057ORF15565P | |
| 15565 | M | M.EcosA4I (100% identity) | M.Eco180057ORF15565P | |
| 15570 | DUF4942 domain-containing protein | |||
| 15830 | endoribonuclease SymE | |||
| 15835 | R | EcosA4IIP (100% identity) | Eco180057ORF15845P | |
| 15840 | S | S.EcosA4II (100% identity) | S.Eco180057ORF15845P | |
| 15845 | M | M.EcosA4II (100% identity) | M.Eco180057ORF15845P | |
| 15850 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2050 | drug/metabolite exporter YedA | |||
| 2055 | V | V.EcosA4DcmP (100% identity) | V.Eco180057DcmP | |
| 2060 | M | M.EcosA33DcmP (100% identity) | CCWGG | M.Eco180057DcmP |
| 2065 | phosphohydrolase | |||
| 5590 | ribosome-associated translation inhibitor RaiA | |||
| 5595 | M | M.SenYU39ORF1896P (100% identity) | M.Eco180057ORF5595P | |
| 5600 | Com family DNA-binding transcriptional | |||
| 9825 | DNA-binding transcriptional regulator Fis | |||
| 9830 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco180057ORF9830P |
| 9835 | DUF2556 domain-containing protein | |||
| 10435 | ribulose-phosphate 3-epimerase | |||
| 10440 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco180057DamP |
| 10445 | cell division protein DamX | |||
| 14140 | PerC family transcriptional regulator | |||
| 14145 | M | M.EcoSCU484ORF22615P (100% identity) | GATC | M.Eco180057ORF14145P |
| 14150 | LexA family transcriptional regulator | |||
| 14180 | 67 aa hypothetical protein | |||
| 14185 | M | M.Sso63633ORF22290P (100% identity) | M.Eco180057ORF14185P | |
| 14190 | phage lysis protein EssD | |||
| 16090 | PerC family transcriptional regulator | |||
| 16095 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco180057ORF16095P |
| 16100 | LexA family transcriptional regulator | |||
| 16135 | 67 aa hypothetical protein | |||
| 16140 | M | M.Ecoi127aORF3990P (100% identity) | M.Eco180057ORF16140P | |
| 16145 | phage holin, lambda family | |||
| 20465 | TraR/DksA family transcriptional regulator | |||
| 20470 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco180057ORF20470P |
| 20475 | replication endonuclease | |||
| 22450 | TrmB family transcriptional regulator | |||
| 22455 | M | M.EcoM3ORF410P (98% identity) | M.Eco180057ORF22455P | |
| 22470 | DUF1737 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15570 | DUF4942 domain-containing protein | |||
| 15575 | R | EcosA4McrBP (100% identity) | Eco180057McrBP | |
| 15580 | R | EcosA4McrCP (100% identity) | Eco180057McrCP | |
| 15585 | HNH endonuclease | |||