|
Putative Lachnospiraceae bacterium KGMB03038 RM systems
Ref: Kim,J.-S. et al. unpublished
REBASE ref # 29571
Complete sequence: 3,334,474 bp
GenBank #: CP041667
REBASE acronym: Lba3038
Org_num: 37460
All begin FND36_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3975 | nucleotidyltransferase domain-containing | |||
3980 | M | M.PmeBin39ORFFP (84% identity) | M.Lba3038ORF3980P | |
3985 | S | S1.PmeBin244ORFAP (35% identity) | S1.Lba3038ORF3980P | |
3990 | DUF3990 domain-containing protein | |||
3995 | 153 aa hypothetical protein | |||
4000 | tyrosine-type recombinase/integrase | |||
4005 | S | S.Fsp81399ORF10000P (42% identity) | S2.Lba3038ORF3980P | |
4010 | R | PmeBin39ORFFP (82% identity) | Lba3038ORF3980P | |
4015 | 338 aa hypothetical protein | |||
5850 | helix-turn-helix transcriptional regulator | |||
5855 | M | M.Lba3038ORFDP (100% identity) | M.Lba3038ORF5855P | |
5860 | S | S.Lba3038ORFDP (100% identity) | S.Lba3038ORF5855P | |
5865 | 356 aa hypothetical protein | |||
5850 | helix-turn-helix transcriptional regulator | |||
5855 | M | M.Lba3038ORF5855P (100% identity) | M.Lba3038ORFDP | |
5860 | S | S.Lba3038ORF5855P (100% identity) | S.Lba3038ORFDP | |
5865 | 356 aa hypothetical protein | |||
14415 | IS256 family transposase | |||
14420 | S | S1.PmeBin612ORFAP (54% identity) | S.Lba3038ORF14425P | |
14425 | M | M.Isp26ORF8705P (87% identity) | M.Lba3038ORF14425P | |
14430 | R | PmeBin612ORFAP (74% identity) | Lba3038ORF14425P | |
14435 | TetR/AcrR family transcriptional regulator | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1975 | conjugal transfer protein TraE | |||
1980 | M | M.Lba3038ORFGP (100% identity) | M.Lba3038ORF1980P | |
1985 | hydrolase | |||
1975 | conjugal transfer protein TraE | |||
1980 | M | M.Lba3038ORF1980P (100% identity) | M.Lba3038ORFGP | |
1985 | hydrolase | |||
2835 | DUF4373 domain-containing protein | |||
2840 | M | M.CscNTI82ORF3074P (80% identity) | M.Lba3038ORF2840P | |
2845 | tyrosine-type recombinase/integrase | |||
3090 | IMP dehydrogenase | |||
3095 | M | M.Lba3038ORFFP (98% identity) | M.Lba3038ORF3095P | |
3100 | zinc dependent phospholipase C family protein | |||
3090 | IMP dehydrogenase | |||
??? | M | M.Lba3038ORF3095P (98% identity) | M.Lba3038ORFFP | |
3100 | zinc dependent phospholipase C family protein | |||
3685 | 289 aa hypothetical protein | |||
3690 | M | M.PmeBin148ORFAP (100% identity) | M.Lba3038ORFEP | |
3695 | PrgI family protein | |||
3685 | 289 aa hypothetical protein | |||
3690 | M | M.PmeBin148ORFAP (100% identity) | M.Lba3038ORF3690P | |
3695 | PrgI family protein | |||
11090 | peptidase M23 | |||
11095 | M | M.RbrL2ORF950P (100% identity) | M.Lba3038ORFAP | |
11100 | conjugal transfer protein TraE | |||
11105 | PrgI family protein | |||
??? | M | M.PmeBin308ORFDP (100% identity) | M.Lba3038ORFBP | |
11120 | conjugal transfer protein | |||
11105 | PrgI family protein | |||
11110 | M | M.RbrL2ORF920P (100% identity) | M.Lba3038ORF11110P | |
11115 | 283 aa hypothetical protein | |||
13900 | CHAP domain-containing protein | |||
13905 | M | M.RtoL2ORF21070P (100% identity) | CCSSGG | M.Lba3038ORFCP |
13910 | conjugal transfer protein TraE | |||
13900 | CHAP domain-containing protein | |||
13905 | M | M.RtoL2ORF21070P (100% identity) | CCSSGG | M.Lba3038ORF13905P |
13910 | conjugal transfer protein TraE | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
6740 | spore coat associated protein CotJA | |||
6745 | M | M.Msp3756ORFJP (40% identity) | M.Lba3038ORF6745P | |
6750 | R | OspNSJ62ORF2015P (65% identity) | Lba3038ORF6745P | |
6755 | class II fructose-1,6-bisphosphate aldolase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
14080 | 170 aa hypothetical protein | |||
14085 | R | Lba3038McrC2P (100% identity) | Lba3038McrCP | |
14090 | ATPase | |||
14095 | IS256 family transposase | |||
14100 | R | Lba3038McrB2P (100% identity) | Lba3038McrBP | |
14105 | 81 aa hypothetical protein | |||
14080 | 170 aa hypothetical protein | |||
14085 | R | Lba3038McrCP (100% identity) | Lba3038McrC2P | |
14090 | ATPase | |||
14095 | IS256 family transposase | |||
14100 | R | Lba3038McrBP (100% identity) | Lba3038McrB2P | |
14105 | 81 aa hypothetical protein | |||
14305 | (deoxy)nucleoside triphosphate | |||
14310 | R | Msp3756ORFGBP (66% identity) | Lba3038ORF14310P | |
14315 | ATP-binding protein |