Escherichia coli ECCTRSRTH03 |
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Putative Escherichia coli ECCTRSRTH03 RM systems
Ref: Fouts,D. et al. unpublished
REBASE ref # 29304
| Sequence length: | GenBank #: | |
| Chromosome: | 4,656,047 bp | CP041110 |
| plasmid unnamed1: | 96,497 bp | CP041111 |
| plasmid unnamed4: | 58,983 bp | CP041114 |
REBASE acronym: EcoTH03
Org_num: 36706
All begin CI675_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9100 | cold-shock protein | |||
| 9105 | R | EhoEh60ORF13695P (100% identity) | EcoTH03ORF9105P | |
| 9110 | M48 family metallopeptidase | |||
| 19450 | DUF262 domain-containing protein | |||
| 19455 | R | EcoXH993ORF23720P (100% identity) | EcoTH03ORF19460P | |
| 19460 | M | M.EcoZ503ORFCP (97% identity) | M.EcoTH03ORF19460P | |
| 19465 | S | S.Ecoa005ORF2260P (100% identity) | S.EcoTH03ORF19460P | |
| 19470 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1640 | cell division protein DamX | |||
| 1645 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTH03DamP |
| 1650 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 domain-containing protein | |||
| 2280 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoTH03ORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 8890 | phosphohydrolase | |||
| 8895 | M | M.Ecostr9DcmP (100% identity) | CCWGG | M.EcoTH03DcmP |
| 8900 | V | V.Ecostr9DcmP (74% identity) | V.EcoTH03DcmP | |
| 8905 | drug/metabolite exporter YedA | |||
| 9335 | 72 aa hypothetical protein | |||
| 9340 | M | M1.EcoST361ORF9210P (100% identity) | M1.EcoTH03ORF9340P | |
| 9345 | M | M2.EcoST361ORF9210P (100% identity) | M2.EcoTH03ORF9340P | |
| 9350 | DUF1317 family protein | |||
| 14655 | replication endonuclease | |||
| 14660 | M | M.EcoBq01ORFAP (100% identity) | GATC | M.EcoTH03ORF14660P |
| 14665 | TraR/DksA family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 23075 | 73 aa hypothetical protein | |||
| 23080 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoTH03ORF23065P |
| 23085 | 0 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 24325 | IS1 family transposase | |||
| 24330 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.EcoTH03ORF24330P |
| 24335 | R | Ubap201ORF4P (100% identity) | CCWGG | EcoTH03ORF24330P |
| 24340 | recombinase family protein | |||