Escherichia coli O145:NM FWSEC0002 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O145:NM FWSEC0002 RM systems
Ref: Tyson,S. et al. unpublished
REBASE ref # 28572
| Sequence length: | GenBank #: | |
| Chromosome: | 5,695,528 bp | CP031919 |
| plasmid unnamed9: | 92,498 bp | CP031920 |
REBASE acronym: Eco0002
Org_num: 34304
All begin CCU01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11905 | IS3-like element IS629 family transposase | |||
| ??? | M | M.EcoSO173ORF28895P (86% identity) | M.Eco0002ORFAP | |
| 11920 | S | S.EcoSO173ORF28895P (95% identity) | S.Eco0002ORFAP | |
| 11925 | YecA family protein | |||
| 11930 | cold shock domain-containing protein | |||
| 11935 | R | EcoSO173ORF28895P (100% identity) | Eco0002ORFAP | |
| 11940 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2195 | protein DamX | |||
| 2200 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0002DamP |
| 2205 | ribulose-phosphate 3-epimerase | |||
| 2775 | DUF2556 domain-containing protein | |||
| 2780 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco0002ORF2780P |
| 2785 | Fis family transcriptional regulator | |||
| 6630 | IS3-like element IS629 family transposase | |||
| 6635 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco0002ORF6635P |
| 6640 | NinE family protein | |||
| 11320 | phosphohydrolase | |||
| 11325 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco0002DcmP |
| 11330 | V | V.SsoSE61DcmP (100% identity) | V.Eco0002DcmP | |
| 11335 | drug/metabolite exporter YedA | |||
| 16470 | 0 aa hypothetical protein | |||
| 16490 | M | M.Eco9097ORF3207P (98% identity) | A | M.Eco0002ORF16490P |
| 16495 | TrmB family transcriptional regulator | |||
| 21385 | NinE family protein | |||
| 21390 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco0002ORF21390P |
| 21395 | recombination protein NinB | |||
| 26295 | IS3 family transposase | |||
| ??? | RM | EcoSO172ORF1005P (100% identity) | Eco0002ORF26300P | |
| 26305 | DEAD/DEAH box helicase | |||
| 28125 | LexA family transcriptional regulator | |||
| 28130 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.Eco0002ORF28130P |
| 28135 | PerC family transcriptional regulator | |||
| 28205 | 173 aa hypothetical protein | |||
| 28210 | M | M.EcoSO179ORF27060P (93% identity) | M.Eco0002ORF28210P | |
| 28215 | 103 aa hypothetical protein | |||
| 29175 | 330 aa hypothetical protein | |||
| 29180 | M | M.SflFF35ORF20P (100% identity) | M.Eco0002ORF29180P | |
| 29185 | 77 aa hypothetical protein | |||
| plasmid unnamed9 | ||||
| 30490 | 72 aa hypothetical protein | |||
| 30495 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco0002ORF30495P |
| 30500 | 0 aa hypothetical protein | |||