Escherichia coli U14A |
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Putative Escherichia coli U14A RM systems
Ref: Forde,B.M. et al. unpublished
REBASE ref # 28281
| Sequence length: | GenBank #: | |
| Chromosome: | 5,061,272 bp | CP035516 |
| plasmid pU14A_A: | 149,317 bp | CP035517 |
| plasmid pU14A_B: | 69,473 bp | CP035518 |
REBASE acronym: EcoU14A
Org_num: 33586
All begin U14A_, U14A_A, U14A_B
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 293 | 156 aa hypothetical protein | |||
| 294 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoU14AORF295P |
| 295 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoU14AORF295P |
| 296 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoU14AORF295P |
| 297 | 260 aa hypothetical protein | |||
| 4807 | Toxic protein SymE | |||
| 4808 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoU14AORF4810P |
| 4809 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoU14AORF4810P |
| 4810 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoU14AORF4810P |
| 4811 | Mrr restriction system protein | |||
| plasmid pU14A_A | ||||
| 35 | 167 aa hypothetical protein | |||
| 36 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoU14AORF38P |
| 37 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoU14AORF38P |
| 38 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoU14AORF38P |
| 39 | 73 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 978 | 71 aa hypothetical protein | |||
| 979 | M | M.KpnYN1ORFGP (89% identity) | M.EcoU14AORF979P | |
| 980 | HTH-type transcriptional regulator ImmR | |||
| 1424 | 65 aa hypothetical protein | |||
| 1425 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoU14AORF1425P |
| 1428 | Anti-adapter protein IraM | |||
| 2099 | inner membrane transporter YedA | |||
| 2100 | V | V.SflC32DcmP (74% identity) | V.EcoU14ADcmP | |
| 2101 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoU14ADcmP |
| 2102 | 231 aa hypothetical protein | |||
| 3492 | DNA-binding protein Fis | |||
| 3493 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoU14AORF3493P |
| 3494 | 59 aa hypothetical protein | |||
| 3612 | Ribulose-phosphate 3-epimerase | |||
| 3613 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoU14ADamP |
| 3614 | Cell division protein DamX | |||
| 4739 | 141 aa hypothetical protein | |||
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoU14AORF4740P |
| 4741 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoU14AORF4740P |
| 4742 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoU14AORF4740P |
| 4743 | 428 aa hypothetical protein | |||
| plasmid pU14A_A | ||||
| 22 | 73 aa hypothetical protein | |||
| 23 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoU14AORF23P |
| 24 | 103 aa hypothetical protein | |||
| plasmid pU14A_B | ||||
| 51 | 73 aa hypothetical protein | |||
| 52 | M | M.Xca80ORFEP (99% identity) | M.EcoU14AORF52P | |
| 53 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4742 | 579 aa hypothetical protein | |||
| ??? | R | EcoU15AMcrCP (100% identity) | EcoU14AMcrCP | |
| 4744 | R | EcosS3McrBP (100% identity) | EcoU14AMcrBP | |
| 4745 | teichuronic acid biosynthesis | |||