Escherichia coli CRE1 |
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Putative Escherichia coli CRE1 RM systems
Ref: Phannachet,K. et al. unpublished
REBASE ref # 28286
| Sequence length: | GenBank #: | |
| Chromosome: | 4,938,997 bp | CP034399 |
| plasmid pCRE1.1: | 134,635 bp | CP034396 |
| plasmid pCRE1.2: | 93,642 bp | CP034397 |
REBASE acronym: EcoCRE1
Org_num: 33589
All begin EJC48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22230 | M48 family peptidase | |||
| 22235 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | EcoCRE1ORF22255P |
| 22240 | Appr-1-p processing protein | |||
| 22245 | DUF4433 domain-containing protein | |||
| 22250 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.EcoCRE1ORF22255P |
| 22255 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.EcoCRE1ORF22255P |
| 22260 | transcription factor | |||
| plasmid pCRE1.1 | ||||
| 685 | IS1 family transposase | |||
| 690 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNNCTGG | EcoCRE1ORF700P |
| 695 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoCRE1ORF700P |
| 700 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNNCTGG | M.EcoCRE1ORF700P |
| 705 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3010 | EamA family transporter | |||
| 3015 | V | V.SsoSE61DcmP (100% identity) | V.EcoCRE1DcmP | |
| 3020 | M | M.EcoVCSW8DcmP (100% identity) | CCWGG | M.EcoCRE1DcmP |
| 3025 | phosphohydrolase | |||
| 10005 | DNA-binding transcriptional regulator Fis | |||
| 10010 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoCRE1ORF10010P |
| 10015 | DUF2556 domain-containing protein | |||
| 10560 | ribulose-phosphate 3-epimerase | |||
| 10565 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCRE1DamP |
| 10570 | cell division protein DamX | |||
| 17790 | PerC family transcriptional regulator | |||
| 17795 | M | M.EcoCRE10ORF23335P (100% identity) | GATC | M.EcoCRE1ORF17795P |
| 17800 | LexA family transcriptional regulator | |||
| 17830 | TrmB family transcriptional regulator | |||
| 17835 | M | M.EcoCRE10ORF23375P (100% identity) | M.EcoCRE1ORF17835P | |
| 17840 | holin | |||
| plasmid pCRE1.1 | ||||
| 575 | 73 aa hypothetical protein | |||
| 580 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoCRE1ORF580P |
| 585 | 0 aa hypothetical protein | |||
| plasmid pCRE1.2 | ||||
| 1395 | 120 aa hypothetical protein | |||
| 1400 | M | M.Sma1978ORFAP (97% identity) | M.EcoCRE1ORF1400P | |
| 1405 | 149 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20870 | TraR/DksA family transcriptional regulator | |||
| 20875 | M | M.EcoTCMB2ORF10935P (100% identity) | GATC | M.EcoCRE1ORF20875P |
| 20880 | replication endonuclease | |||