Escherichia coli NCTC9087 |
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Putative Escherichia coli NCTC9087 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,594,692 bp
GenBank #: LR134231
REBASE acronym: Eco9087
Org_num: 32344
All begin NCTC9087_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3781 | methylated adenine and cytosine restriction | |||
| 3782 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | Eco9087IP |
| 3783 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.Eco9087I |
| 3784 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.Eco9087I |
| 3786 | DEAD-box helicase-like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 323 | DamX protein | |||
| 324 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9087Dam |
| 325 | ribulose-phosphate 3-epimerase | |||
| 450 | membrane protein | |||
| 451 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9087ORF451P |
| 452 | DNA-binding protein Fis | |||
| 1758 | phosphohydrolase | |||
| 1759 | M | M.SflLIN6DcmP (99% identity) | CCWGG | M.Eco9087DcmP |
| 1760 | V | V.SflFF59DcmP (100% identity) | V.Eco9087DcmP | |
| 1761 | DMT superfamily transporter inner | |||
| 2372 | Uncharacterized conserved protein | |||
| 2373 | M | M.Sen58011ORF9805P (100% identity) | M.Eco9087ORF2373P | |
| 2374 | prophage protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2598 | isocitrate dehydrogenase | |||
| 2599 | R | Ecos15955McrCP (100% identity) | Eco9087McrCP | |
| 2600 | R | Ecos15955McrBP (99% identity) | Eco9087McrBP | |
| 2602 | host-nuclease inhibitor protein Gam | |||
| 3780 | GTP-binding protein YjiA | |||
| 3781 | R | Ssp28760MrrP (100% identity) | Eco9087MrrP | |
| 3782 | type I restriction enzyme EcoKI subunit R | |||