Escherichia coli NCTC9102 |
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Putative Escherichia coli NCTC9102 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,573,055 bp
GenBank #: LR134227
REBASE acronym: Eco9102
Org_num: 32347
All begin NCTC9102_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1097 | IS1 transposase | |||
| 1098 | R | Sen12509ORF5865P (99% identity) | Eco9102ORF1103P | |
| 1099 | S | S.EhoC4ORF16660P (67% identity) | S.Eco9102ORF1103P | |
| 1100 | IS1 transposase | |||
| 1101 | IS1 transposase | |||
| 1102 | type I restriction-modification system, S | |||
| 1103 | M | M.SenS688ORF13495P (100% identity) | M.Eco9102ORF1103P | |
| 1104 | ybl116 | |||
| 3850 | methylated adenine and cytosine restriction | |||
| 3851 | R | EcoN61ORF38010P (100% identity) | AACNNNNNNGTGC | Eco9102IP |
| 3852 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco9102I |
| 3853 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco9102I |
| 3855 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 326 | DamX protein | |||
| 327 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9102DamP |
| 328 | ribulose-phosphate 3-epimerase | |||
| 459 | membrane protein | |||
| 460 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9102ORF460P |
| 461 | DNA-binding protein Fis | |||
| 1647 | Uncharacterised protein | |||
| 1648 | R | EcoYSP81ORFBP (100% identity) | RCSRC | Eco9102ORF1648P |
| 1649 | ybl103 | |||
| 1810 | phosphohydrolase | |||
| 1811 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco9102DcmP |
| 1812 | V | V.EcoSCU109DcmP (100% identity) | V.Eco9102DcmP | |
| 1813 | DMT superfamily transporter inner | |||
| 2932 | replication protein for prophage | |||
| 2933 | M | M.EcoTO6ORF3189P (100% identity) | GATC | M.Eco9102ORF2933P |
| 2934 | TraR/DksA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3849 | GTP-binding protein YjiA | |||
| 3850 | R | SenHNK130MrrP (100% identity) | Eco9102MrrP | |
| 3851 | type I restriction enzyme EcoKI subunit R | |||
| 3853 | EcoKI restriction-modification system protein | |||
| 3855 | R | Msa17McrB2P (100% identity) | Eco9102McrBP | |
| 3856 | R | SenHNK130McrCP (100% identity) | Eco9102McrCP | |