Salmonella enterica subsp. enterica CFSAN024768 |
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Putative Salmonella enterica subsp. enterica CFSAN024768 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 19164
GenBank #: JWQL00000000
REBASE acronym: Sen24768
Org_num: 32278
All begin QS19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22930 | transporter | |||
| 22935 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen24768ORF22945P |
| 22940 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen24768ORF22945P |
| 22945 | M | M.Sen24769ORF13245P (100% identity) | GGYANNNNNNTCG | M.Sen24768ORF22945P |
| 22950 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8615 | ribulose-phosphate 3-epimerase | |||
| 8620 | M | M.StyTDamP (100% identity) | GATC | M.Sen24768DamP |
| 8625 | cell division protein DamX | |||
| 17440 | hydrolase | |||
| 17445 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen24768DcmP |
| 17450 | V | V.StyUK1DcmP (100% identity) | V.Sen24768DcmP | |
| 17455 | multidrug DMT transporter | |||
| 18215 | Fis family transcriptional regulator | |||
| 18220 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24768ORF18220P |
| 18225 | membrane protein | |||
| 5550 | endonuclease | |||
| 5555 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen24768ORF5555P |
| 5560 | 75 aa hypothetical protein | |||
| 12835 | bacteriophage protein | |||
| 12840 | M | M.Ssp3CORF17125P (100% identity) | M.Sen24768ORF12840P | |
| 12845 | 190 aa hypothetical protein | |||
| 11610 | 249 aa hypothetical protein | |||
| 11615 | M | M.Ssp3CORF22905P (100% identity) | M.Sen24768ORF11615P | |
| 11620 | 245 aa hypothetical protein | |||
| 11685 | 157 aa hypothetical protein | |||
| 11690 | M | M.Ssp3CORF22825P (100% identity) | M.Sen24768ORF11690P | |
| 11695 | crossover junction endodeoxyribonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19615 | 33 aa hypothetical protein | |||
| 19620 | R | Ssp3CORF13760P (99% identity) | CAGAG | Sen24768ORF19625P |
| 19625 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen24768ORF19625P |
| 19630 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22945 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | Sen24768MrrP | |
| 22965 | pseudogene | |||