Escherichia coli NCTC11105 |
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Putative Escherichia coli NCTC11105 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,692,802 bp
GenBank #: LR134157
REBASE acronym: Eco11105
Org_num: 32328
All begin NCTC11105_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2006 | Uncharacterised protein | |||
| 2007 | M | M.EcosB2CORFFP (100% identity) | GGCANNNNNNNTTC | M.Eco11105ORF2007P |
| 2008 | S | S.EcosB2CORFFP (100% identity) | GGCANNNNNNNTTC | S.Eco11105ORF2007P |
| 2009 | metal-binding protein | |||
| 2010 | R | EcosB2CORFFP (99% identity) | GGCANNNNNNNTTC | Eco11105ORF2007P |
| 2011 | hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 394 | DamX protein | |||
| 395 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco11105DamP |
| 396 | ribulose-phosphate 3-epimerase | |||
| 524 | membrane protein | |||
| 525 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco11105ORF525P |
| 526 | DNA-binding protein Fis | |||
| 1301 | phage protein | |||
| 1302 | M | M.EcosE1ORFEP (100% identity) | M.Eco11105ORF1302P | |
| 1303 | transcriptional activator from phage | |||
| 1933 | phosphohydrolase | |||
| 1934 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco11105DcmP |
| 1935 | V | V.SsoSE61DcmP (100% identity) | V.Eco11105DcmP | |
| 1936 | DMT superfamily transporter inner | |||
| 3905 | LexA repressor | |||
| 3906 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco11105ORF3906P |
| 3907 | CPS-53 (KpLE1) prophage protein | |||
| 4328 | KpLE2 phage-like element | |||
| 4329 | M | M.EcosB7ADndBP (100% identity) | M.Eco11105DndBP | |
| 4330 | PUA domain (predicted RNA-binding domain) | |||
| 4329 | DNA thiolation protein; phage protein | |||
| 4330 | M | M.EcosB7ADndCP (99% identity) | M.Eco11105DndCP | |
| 4331 | ATPase involved in DNA thiolation | |||
| 4330 | PUA domain (predicted RNA-binding domain) | |||
| 4331 | M | M.EcosB7ADndDP (100% identity) | M.Eco11105DndDP | |
| 4332 | DNA thiolation protein; phage protein | |||
| 4331 | ATPase involved in DNA thiolation | |||
| 4332 | M | M.EcosB7ADndEP (100% identity) | M.Eco11105DndEP | |
| 4333 | cytochrome c biogenesis protein CcmA | |||
| 4334 | Uncharacterized conserved protein | |||
| 4335 | R | EcosB7ADptHP (78% identity) | Eco11105DptHP | |
| 4336 | DNA phosphorothioation-dependent restriction | |||
| 4335 | Type IV secretory pathway, VirB4 components | |||
| 4336 | R | EcosB7ADptHP (18% identity) | Eco11105DptH2P | |
| 4337 | DNA phosphorothioation-dependent restriction | |||
| 4336 | DNA phosphorothioation-dependent restriction | |||
| 4337 | R | EcosB7ADptGP (100% identity) | Eco11105DptGP | |
| 4338 | DNA phosphorothioation-dependent restriction | |||
| 4337 | DNA phosphorothioation-dependent restriction | |||
| 4338 | R | EcosB7ADptFP (100% identity) | Eco11105DptFP | |
| 4339 | integrase | |||