Escherichia coli WCHEC020031 |
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Putative Escherichia coli WCHEC020031 RM systems
Ref: Liu,L. et al. unpublished
REBASE ref # 25198
| Sequence length: | GenBank #: | |
| Chromosome: | 4,750,764 bp | CP033401 |
| plasmid pOXA1_020031: | 91,652 bp | CP033400 |
REBASE acronym: Eco20031
Org_num: 31573
All begin EDM51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8645 | transcription factor | |||
| 8650 | M | M.EcosE2ORF13465P (99% identity) | YTCANNNNNNGTTY | M.Eco20031ORF8650P |
| 8655 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.Eco20031ORF8650P |
| 8660 | DUF4433 domain-containing protein | |||
| 8665 | Appr-1-p processing protein | |||
| 8670 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | Eco20031ORF8650P |
| 8675 | M48 family peptidase | |||
| 23855 | IS1 family transposase | |||
| 23860 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco20031ORF23870P |
| 23865 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco20031ORF23870P |
| 23870 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco20031ORF23870P |
| 23875 | IS3 family transposase | |||
| plasmid pOXA1_020031 | ||||
| 940 | IS1 family transposase | |||
| 945 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNNCTGG | Eco20031ORF955P |
| 950 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco20031ORF955P |
| ??? | M | M.Ecos2020ORFGP (100% identity) | CAAYNNNNNNCTGG | M.Eco20031ORF955P |
| 960 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4055 | phosphohydrolase | |||
| 4060 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco20031DcmP |
| 4065 | V | V.SsoSE61DcmP (100% identity) | V.Eco20031DcmP | |
| 4070 | EamA family transporter | |||
| 16915 | 345 aa hypothetical protein | |||
| 16920 | M | M.EcosE2ORF21575P (100% identity) | M.Eco20031ORF16920P | |
| 16925 | 68 aa hypothetical protein | |||
| 20005 | protein DamX | |||
| 20010 | M | DNA adenine methylase | GATC | M.Eco20031DamP |
| 20015 | ribulose-phosphate 3-epimerase | |||
| 20635 | DUF2556 domain-containing protein | |||
| 20640 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco20031ORF20640P |
| 20645 | Fis family transcriptional regulator | |||
| plasmid pOXA1_020031 | ||||
| 830 | 73 aa hypothetical protein | |||
| 835 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco20031ORF835P |
| 840 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7940 | isocitrate dehydrogenase | |||
| 7945 | R | EcosEC27McrCP (100% identity) | Eco20031McrCP | |
| 7950 | R | EcoteDMcrBP (100% identity) | Eco20031McrBP | |
| 7955 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9875 | replication endonuclease | |||
| 9880 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco20031ORF9880P |
| 9885 | TraR/DksA family transcriptional regulator | |||