Escherichia coli SK1144 |
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Putative Escherichia coli SK1144 RM systems
Ref: Tanimoto,Y. et al. Infect. Immun. 87 (2018) In press
REBASE ref # 27649
| Sequence length: | GenBank #: | |
| Chromosome: | 5,029,297 bp | AP018784 |
| plasmid pSK1144: | 169,561 bp | AP018785 |
REBASE acronym: Eco1144
Org_num: 31519
All begin DAECLI1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 35960 | 962 aa hypothetical protein | |||
| 35970 | R | Sso8ORF18020P (100% identity) | Eco1144ORF1066P | |
| 35980 | 395 aa hypothetical protein | |||
| 35990 | S | S.Sso8ORF18020P (100% identity) | S.Eco1144ORF1066P | |
| 36000 | M | M.Sso8ORF18020P (100% identity) | M.Eco1144ORF1066P | |
| 36010 | anti-phage ZorAB system protein ZorA | |||
| 39600 | DUF262 domain-containing protein | |||
| 39610 | M | M.EcoZ247ORF19790P (100% identity) | M.Eco1144ORF704P | |
| 39620 | S | S.EcoZ247ORF19790P (100% identity) | S.Eco1144ORF704P | |
| 39630 | R | EcoZ247ORF19790P (100% identity) | Eco1144ORF704P | |
| 39640 | 237 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3350 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1144DamP |
| 3370 | ribulose-phosphate 3-epimerase | |||
| 4470 | multidrug efflux transporter transcriptional | |||
| 4480 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1144ORF4210P |
| 4490 | DNA-binding transcriptional regulator Fis | |||
| 18140 | phosphohydrolase | |||
| 18150 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco1144DcmP |
| 18160 | V | V.SflC32DcmP (74% identity) | V.Eco1144DcmP | |
| 18170 | drug/metabolite exporter YedA | |||
| 29400 | transcriptional regulator | |||
| 29410 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco1144ORF1723P | |
| 29420 | 71 aa hypothetical protein | |||
| 40550 | 166 aa hypothetical protein | |||
| 40560 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco1144ORF610P |
| 40570 | ATP-binding protein | |||
| 40580 | 607 aa hypothetical protein | |||
| 40590 | R | Ecou021ORF20225P (100% identity) | Eco1144ORF40590P | |
| 40600 | 97 aa hypothetical protein | |||
| plasmid pSK1144 | ||||
| 10026 | YfaB | |||
| 10027 | M | M.Sfl7ORF23565P (100% identity) | M.Eco1144ORF10027P | |
| 10028 | YfcA | |||
| 10163 | YfaB | |||
| 10164 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1144ORF10164P |
| 10165 | YfcA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39590 | Fic family protein | |||
| 39600 | R | EcoW004GmrDP (100% identity) | Eco1144GmrDP | |
| 39610 | class I SAM-dependent DNA methyltransferase | |||