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Putative Pseudomonas syringae pv. actinidiae Shaanxi_M228 RM systems
Ref: Butler,M.I. et al. PLoS ONE 8 (2), e57464 (2013)
REBASE ref # 15612
Complete sequence: 6,674,594 bp
GenBank #: CP032631
REBASE acronym: PsyM228
Org_num: 29942
All begin CN228_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
25 | M | M.PsyYXH1ORFAP (100% identity) | GAYCNNNNNCTGC | M.PsyM228I |
30 | S | S1.PsyYXH1ORFAP (100% identity) | GAYCNNNNNCTGC | S.PsyM228I |
35 | R | PsyYXH1ORFAP (100% identity) | GAYCNNNNNCTGC | PsyM228IP |
40 | M48 family peptidase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
4630 | IS3 family transposase | |||
??? | RM | PsyQSY6ORFEP (100% identity) | PsyM228ORFEP | |
4650 | ATP-dependent helicase | |||
8420 | IS3-like element ISPsy31 family transposase | |||
??? | M | M.PsyYXH1ORFDP (100% identity) | M.PsyM228ORFDP | |
8430 | ATP-binding protein | |||
8435 | R | PsyYXH1ORFDP (100% identity) | PsyM228ORFDP | |
8440 | PD-(D/E)XK motif protein | |||
30365 | ATP-binding protein | |||
30370 | M | M.PsyYXH1ORFFP (100% identity) | CTCGAG | M.PsyM228ORFBP |
30375 | 236 aa hypothetical protein | |||
30380 | R | PsyYXH1ORFFP (100% identity) | CTCGAG | PsyM228ORFBP |
30385 | magnesium chelatase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
23220 | 175 aa hypothetical protein | |||
23225 | R | PsyYXH1ORFCP (100% identity) | PsyM228ORFCP | |
??? | M | M.PsyYXH1ORFCP (100% identity) | M.PsyM228ORFCP | |
23235 | membrane-associated oxidoreductase |