Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-48 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-48 RM systems
Ref: Duceppe,M.-O. et al. unpublished
REBASE ref # 27136
Contig set: 4,884,800 bp
GenBank #: PYUU00000000 (NZ_PYUU00000000)
REBASE acronym: Sen482
Org_num: 31136
All begin C5H96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23550 | endoribonuclease SymE | |||
| 23555 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen482ORF23560P |
| 23560 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen482ORF23560P |
| 23565 | R | SenC56ORF23565P (100% identity) | GAGNNNNNNRTAYG | Sen482ORF23560P |
| 23570 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10410 | RusA family crossover junction | |||
| 10415 | M | M.StyUK1V (100% identity) | GATC | M.Sen482ORF10415P |
| 10420 | 174 aa hypothetical protein | |||
| 18200 | ribulose-phosphate 3-epimerase | |||
| 18205 | M | M.StyTDamP (100% identity) | GATC | M.Sen482DamP |
| 18210 | cell division protein DamX | |||
| 10160 | drug/metabolite exporter YedA | |||
| 10165 | V | V.StyUK1DcmP (100% identity) | V.Sen482DcmP | |
| 10170 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen482DcmP |
| 10175 | phosphohydrolase | |||
| 17720 | Fis family transcriptional regulator | |||
| 17725 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen482ORF17725P |
| 17730 | DUF2556 domain-containing protein | |||
| 24685 | 62 aa hypothetical protein | |||
| 24690 | M | M.StyUK1ORFAP (100% identity) | M.Sen482ORF24690P | |
| 24695 | 73 aa hypothetical protein | |||
| 23380 | 363 aa hypothetical protein | |||
| 23385 | RM | StyUK1IV (100% identity) | GATCAG | Sen482ORF23385P |
| 23390 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1595 | MFS transporter | |||
| 1600 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen482ORF1600P |
| 1605 | R | StyUK1IP (99% identity) | CAGAG | Sen482ORF1600P |
| 1610 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23565 | type I restriction-modification system | |||
| 23570 | R | StyUK1MrrP (100% identity) | Sen482MrrP | |
| 23575 | 95 aa hypothetical protein | |||