Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-47 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-47 RM systems
Ref: Duceppe,M.-O. et al. unpublished
REBASE ref # 27136
Contig set: 4,881,169 bp
GenBank #: PYUT00000000 (NZ_PYUT00000000)
REBASE acronym: Sen471
Org_num: 31135
All begin C5I05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23535 | endoribonuclease SymE | |||
| 23540 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen471ORF23545P |
| 23545 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen471ORF23545P |
| 23550 | R | SenC56ORF23565P (100% identity) | GAGNNNNNNRTAYG | Sen471ORF23545P |
| 23555 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10390 | RusA family crossover junction | |||
| 10395 | M | M.StyUK1V (100% identity) | GATC | M.Sen471ORF10395P |
| 10400 | 174 aa hypothetical protein | |||
| 18185 | ribulose-phosphate 3-epimerase | |||
| 18190 | M | M.StyTDamP (100% identity) | GATC | M.Sen471DamP |
| 18195 | cell division protein DamX | |||
| 10140 | drug/metabolite exporter YedA | |||
| 10145 | V | V.StyUK1DcmP (100% identity) | V.Sen471DcmP | |
| 10150 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen471DcmP |
| 10155 | phosphohydrolase | |||
| 17710 | Fis family transcriptional regulator | |||
| 17715 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen471ORF17715P |
| 17720 | DUF2556 domain-containing protein | |||
| 24485 | 62 aa hypothetical protein | |||
| 24490 | M | M.StyUK1ORFAP (100% identity) | M.Sen471ORF24490P | |
| 24495 | 73 aa hypothetical protein | |||
| 23365 | 363 aa hypothetical protein | |||
| 23370 | RM | StyUK1IV (100% identity) | GATCAG | Sen471ORF23370P |
| 23375 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1595 | MFS transporter | |||
| 1600 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen471ORF1600P |
| 1605 | R | StyUK1IP (99% identity) | CAGAG | Sen471ORF1600P |
| 1610 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23550 | type I restriction-modification system | |||
| 23555 | R | StyUK1MrrP (100% identity) | Sen471MrrP | |
| 23560 | 95 aa hypothetical protein | |||