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Putative Clostridioides difficile 020709 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 27514
Complete sequence: 4,091,287 bp
GenBank #: CP028529
REBASE acronym: Cdi20709
Org_num: 31219
All begin DA434_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
15710 | DUF262 domain-containing protein | |||
15715 | R | CdiCd23ORF15855P (100% identity) | GAANNNNNNCTG | Cdi20709ORF15735P |
15720 | 142 aa hypothetical protein | |||
15725 | nucleotidyltransferase domain-containing | |||
15730 | S | S.CdiEW50II (100% identity) | GAANNNNNNCTG | S.Cdi20709ORF15735P |
15735 | M | M.PdiZ31ORF1268P (100% identity) | GAANNNNNNCTG | M.Cdi20709ORF15735P |
15740 | ketose-bisphosphate aldolase | |||
16260 | 111 aa hypothetical protein | |||
16265 | R | CdiS0942ORF16230P (100% identity) | AYGNNNNNNCTG | Cdi20709ORF16290P |
16270 | 300 aa hypothetical protein | |||
16275 | 106 aa hypothetical protein | |||
16280 | 150 aa hypothetical protein | |||
16285 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.Cdi20709ORF16290P |
16290 | M | M.CdiRSS2ORF3900P (100% identity) | AYGNNNNNNCTG | M.Cdi20709ORF16290P |
16295 | 81 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2530 | 96 aa hypothetical protein | |||
2535 | M | M.CdiEW50IV (100% identity) | CTGCAG | M.Cdi20709ORF2535P |
2540 | R | CdiEW50IVP (100% identity) | CTGCAG | Cdi20709ORF2535P |
2545 | 178 aa hypothetical protein | |||
14465 | patatin-like phospholipase family protein | |||
14470 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20709ORF14470P |
14475 | Rrf2 family transcriptional regulator | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
10990 | AAA family ATPase | |||
10995 | R | Cdo002McrCP (100% identity) | Cdi20709McrCP | |
11000 | R | Pdi6602McrBP (100% identity) | Cdi20709McrBP | |
11005 | cell division protein |