Escherichia coli Nissle 1917M |
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Putative Escherichia coli Nissle 1917M RM systems
Ref: McClelland,M. and Chu,W. unpublished
REBASE ref # 27484
Complete sequence: 5,055,316 bp
GenBank #: CP022686
REBASE acronym: Eco1917M
Org_num: 31333
All begin CIW80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17365 | endoribonuclease SymE | |||
| 17370 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco1917MORF17380P |
| 17375 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco1917MORF17380P |
| 17380 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco1917MORF17380P |
| 17385 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2425 | holin | |||
| 2430 | M | M.EcoZE21ORF10265P (100% identity) | M.Eco1917MORF2430P | |
| 2435 | TrmB family transcriptional regulator | |||
| 2465 | RusA family crossover junction | |||
| 2470 | M | M.EcoZE21ORF10305P (100% identity) | M.Eco1917MORF2470P | |
| 2475 | GntR family transcriptional regulator | |||
| 3015 | drug/metabolite exporter YedA | |||
| 3020 | V | V.EcosC25DcmP (100% identity) | V.Eco1917MDcmP | |
| 3025 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1917MDcmP |
| 3030 | phosphohydrolase | |||
| 10805 | Fis family transcriptional regulator | |||
| 10810 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1917MORF10810P |
| 10815 | transporter | |||
| 11440 | ribulose-phosphate 3-epimerase | |||
| 11445 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1917MDamP |
| 11450 | cell division protein DamX | |||
| 16970 | 0 aa hypothetical protein | |||
| 16975 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco1917MORF16975P |
| 16980 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco1917MORF16975P |
| 16985 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1917MORF16975P |
| 16990 | restriction endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24375 | recombination protein NinB | |||
| 24380 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1917MORF24380P |
| 24385 | NinE family protein | |||