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Putative Novosphingobium species THN1 RM systems
Ref: Wang,J.P. unpublished
REBASE ref # 27451
Complete sequence: 3,487,514 bp
GenBank #: CP028347
REBASE acronym: NspTHN1
Org_num: 30999
All begin C7W88_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3000 | DNA-binding protein | |||
3005 | R | AspH2ORF9325P (95% identity) | GAYCNNNNNRTTC | NspTHN1IP |
3010 | S | S.Bpa21ORFBP (58% identity) | GAYCNNNNNRTTC | S.NspTHN1I |
3015 | anticodon nuclease | |||
3020 | M | M.SbaLL03ORF21605P (82% identity) | GAYCNNNNNRTTC | M.NspTHN1I |
3025 | 403 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
4490 | 578 aa hypothetical protein | |||
4495 | RM | SspVSS1ORF1575P (64% identity) | NspTHN1ORF4495P | |
4500 | helicase | |||
9470 | 554 aa hypothetical protein | |||
9475 | M | M.Pfl2012ORF11040P (57% identity) | M.NspTHN1ORF9475P | |
9480 | V | V.SspFD7ORF1507P (61% identity) | V.NspTHN1ORF9475P | |
9485 | 0 aa hypothetical protein | |||
12030 | ribonuclease HII | |||
12035 | M | M.NarDORF1840P (95% identity) | GANTC | M.NspTHN1II |
12040 | dihydropteroate synthase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1755 | 631 aa hypothetical protein | |||
1760 | M | M.Nca3ORF17700P (73% identity) | M.NspTHN1ORF1760P | |
??? | R | NspHII3ORFHP (63% identity) | NspTHN1ORF1760P | |
1770 | 545 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
4510 | WYL domain-containing protein | |||
??? | R | NarDMcrCP (37% identity) | NspTHN1McrBCP | |
4525 | R | NspTHN1McrBCP (22% identity) | NspTHN1McrBP | |
4540 | DUF2779 domain-containing protein |