Escherichia fergusonii 40A |
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Putative Escherichia fergusonii 40A RM systems
Ref: Galetti,R. et al. unpublished
REBASE ref # 27354
| Sequence length: | GenBank #: | |
| Chromosome: | 4,515,966 bp | CP031282 |
| plasmid p280_40A: | 279,537 bp | CP031284 |
| plasmid p80_40A: | 79,635 bp | CP031286 |
REBASE acronym: Efe40A
Org_num: 30642
All begin DKG79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22870 | NAD(P)-dependent alcohol dehydrogenase | |||
| 22880 | R | EcoPO3ORF25115P (97% identity) | Efe40AORF22895P | |
| 22885 | S | S.EcoB185ORFDP (46% identity) | S1.Efe40AORF22895P | |
| 22890 | S | S.Eco50EVAORFGP (52% identity) | S2.Efe40AORF22895P | |
| 22895 | M | M.Eco19035ORF3645P (99% identity) | M.Efe40AORF22895P | |
| 22900 | DUF4942 domain-containing protein | |||
| 23025 | endoribonuclease SymE | |||
| ??? | S | S.EfeI (97% identity) | S.Efe40AORF23040P | |
| 23040 | M | M.EfeC10ORF18400P (99% identity) | M.Efe40AORF23040P | |
| 23045 | R | type I restriction-modification system | Efe40AORF23040P | |
| 23050 | cell filamentation protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1595 | cell division protein ZapA | |||
| 1600 | M | M.Sbo812ORFAP (99% identity) | M.Efe40AORF1600P | |
| 1605 | DUF1317 family protein | |||
| 15985 | LexA family transcriptional regulator | |||
| ??? | M | M.Sdy9751ORFJP (96% identity) | M.Efe40AORF15990P | |
| 16000 | helix-turn-helix domain-containing protein | |||
| 17860 | acetate operon transcriptional repressor IclR | |||
| 17865 | M | M.EfeLTORF39400P (99% identity) | M.Efe40AORF17865P | |
| 17870 | bifunctional isocitrate dehydrogenase | |||
| 21630 | cell division protein DamX | |||
| 21635 | M | M.EfeTDamP (100% identity) | M.Efe40ADamP | |
| 21640 | ribulose-phosphate 3-epimerase | |||
| 22175 | DUF2556 domain-containing protein | |||
| ??? | M | M.EfeIV (91% identity) | M.Efe40AORF22180P | |
| 22185 | DNA-binding transcriptional regulator Fis | |||
| plasmid p280_40A | ||||
| 24945 | 284 aa hypothetical protein | |||
| 24950 | M | M.YpsF1ORFDP (100% identity) | M.Efe40AORF24950P | |
| 24955 | DNA-binding protein | |||
| 25095 | 202 aa hypothetical protein | |||
| 25100 | M | M.YpsF1ORFBP (97% identity) | M.Efe40AORF25100P | |
| 25105 | DNA methyltransferase | |||
| 25750 | nuclease | |||
| 25755 | M | M.YpsF1ORFCP (100% identity) | M.Efe40AORF25755P | |
| 25760 | DUF1173 family protein | |||
| plasmid p80_40A | ||||
| 26635 | 0 aa hypothetical protein | |||
| ??? | M | M.Sfl74ORF26105P (68% identity) | M.Efe40AORFAP | |
| 26645 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23010 | DUF1998 domain-containing protein | |||
| 23015 | R | Efe5McrCP (90% identity) | Efe40AMcrCP | |
| 23020 | R | EfeTMcrBP (99% identity) | Efe40AMcrBP | |
| 23025 | endoribonuclease SymE | |||