Escherichia coli SP-46 Combo |
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Putative Escherichia coli SP-46 Combo RM systems
Ref: Xu,A. et al. unpublished
REBASE ref # 27075
Contig set: 5,260,661 bp
GenBank #: POSV00000000 (NZ_POSV00000000)
REBASE acronym: EcoSP46
Org_num: 30233
All begin C1N94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2970 | DUF262 domain-containing protein | |||
| 2975 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | EcoSP46ORF2980P |
| 2980 | M | M.SspS13ORF3945P (100% identity) | CAAYNNNNNNNNTGAG | M.EcoSP46ORF2980P |
| 2985 | S | S.EcoSP5ORF2185P (100% identity) | CAAYNNNNNNNNTGAG | S.EcoSP46ORF2980P |
| 2990 | endoribonuclease SymE | |||
| 3215 | 128 aa hypothetical protein | |||
| 3220 | M | M.EcoSP5ORF1945P (100% identity) | TGHAYNNNNCTNC | M.EcoSP46ORF3220P |
| 3225 | S | S.EcoSP5ORF1945P (100% identity) | S.EcoSP46ORF3220P | |
| 3230 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26540 | 73 aa hypothetical protein | |||
| 26560 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoSP46ORF26560P |
| 26565 | TrmB family transcriptional regulator | |||
| 21000 | 73 aa hypothetical protein | |||
| 21005 | M | M.Sen1357ORF24335P (100% identity) | M.EcoSP46ORF21005P | |
| 21010 | 0 aa hypothetical protein | |||
| 20025 | 257 aa hypothetical protein | |||
| 20030 | M | M.Sso8033ORF3755P (100% identity) | M.EcoSP46ORF20030P | |
| 20035 | R | Sso8033ORF3755P (99% identity) | EcoSP46ORF20030P | |
| 20040 | endolysin | |||
| 22600 | PerC family transcriptional regulator | |||
| 22605 | M | M.SflFF35ORF16050P (100% identity) | GATC | M.EcoSP46ORF22605P |
| 22610 | LexA family transcriptional regulator | |||
| 21370 | EamA family transporter | |||
| 21375 | V | V.SflC32DcmP (74% identity) | V.EcoSP46DcmP | |
| 21380 | M | M.EcoSP5DcmP (100% identity) | CCWGG | M.EcoSP46DcmP |
| 21385 | phosphohydrolase | |||
| 18985 | Fis family transcriptional regulator | |||
| 18990 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoSP46ORF18990P |
| 18995 | DUF2556 domain-containing protein | |||
| 3860 | cell division protein DamX | |||
| 3865 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSP46DamP |
| 3870 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3200 | HNH endonuclease | |||
| 3205 | R | EcoSCU175McrBP (100% identity) | EcoSP46McrBP | |
| 3210 | R | EcoSP5McrCP (100% identity) | EcoSP46McrCP | |
| 3215 | 128 aa hypothetical protein | |||