Escherichia coli F356 |
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Putative Escherichia coli F356 RM systems
Ref: Xu,A. et al. unpublished
REBASE ref # 27038
Contig set: 5,490,638 bp
GenBank #: PSNT00000000 (NZ_PSNT00000000)
REBASE acronym: EcoF356
Org_num: 30187
All begin C4M76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4420 | NAD(P)-dependent alcohol dehydrogenase | |||
| 4430 | R | EcosA33IP (100% identity) | EcoF356ORF4440P | |
| 4435 | S | S.EcosA4I (100% identity) | S.EcoF356ORF4440P | |
| 4440 | M | M.EcosA4I (100% identity) | M.EcoF356ORF4440P | |
| 4445 | DUF4942 domain-containing protein | |||
| 4720 | endoribonuclease SymE | |||
| 4725 | R | EcosA4IIP (100% identity) | EcoF356ORF4735P | |
| 4730 | S | S.EcosA4II (100% identity) | S.EcoF356ORF4735P | |
| 4735 | M | M.EcosA4II (100% identity) | M.EcoF356ORF4735P | |
| 4740 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 27285 | 73 aa hypothetical protein | |||
| 27290 | M | M.SenS1545ORF25100P (100% identity) | M.EcoF356ORF27275P | |
| 27295 | 97 aa hypothetical protein | |||
| 21325 | 101 aa hypothetical protein | |||
| 21330 | M | M.SspPIBORF23080P (100% identity) | M.EcoF356ORF21330P | |
| 21335 | 73 aa hypothetical protein | |||
| 26215 | LexA family transcriptional regulator | |||
| 26220 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.EcoF356ORF26220P |
| 26225 | PerC family transcriptional regulator | |||
| 14250 | PerC family transcriptional regulator | |||
| 14255 | M | M.Eco5202ORF2574P (99% identity) | M.EcoF356ORF14255P | |
| 14260 | 64 aa hypothetical protein | |||
| 14940 | transcriptional regulator | |||
| 14945 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoF356ORF14945P | |
| 14950 | 71 aa hypothetical protein | |||
| 15775 | 68 aa hypothetical protein | |||
| 15780 | M | M.EcosE2ORF21575P (100% identity) | M.EcoF356ORF15780P | |
| 15785 | 345 aa hypothetical protein | |||
| 18570 | Fis family transcriptional regulator | |||
| 18575 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoF356ORF18575P |
| 18580 | DUF2556 domain-containing protein | |||
| 540 | phosphohydrolase | |||
| 545 | M | M.EcosA33DcmP (100% identity) | CCWGG | M.EcoF356DcmP |
| 550 | V | V.EcosA4DcmP (100% identity) | V.EcoF356DcmP | |
| 555 | drug/metabolite exporter YedA | |||
| 11415 | cell division protein DamX | |||
| 11420 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoF356DamP |
| 11425 | ribulose-phosphate 3-epimerase | |||
| 7615 | replication endonuclease | |||
| 7620 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoF356ORF7620P |
| 7625 | 75 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4445 | DUF4942 domain-containing protein | |||
| 4450 | R | EcosA4McrBP (100% identity) | EcoF356McrBP | |
| 4455 | R | EcosA4McrCP (100% identity) | EcoF356McrCP | |
| 4460 | HNH endonuclease | |||