Escherichia coli DV42a |
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Putative Escherichia coli DV42a RM systems
Ref: Browne,A.S. unpublished
REBASE ref # 27025
Contig set: 5,309,884 bp
GenBank #: PELI00000000 (NZ_PELI00000000)
REBASE acronym: EcoDV42
Org_num: 30177
All begin CTZ36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1360 | DUF262 domain-containing protein | |||
| 1365 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoDV42ORF1370P |
| 1370 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoDV42ORF1370P |
| 1375 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoDV42ORF1370P |
| 1380 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 27240 | lipoprotein | |||
| 27245 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoDV42ORF27245P | |
| 27260 | 61 aa hypothetical protein | |||
| 27080 | NinE family protein | |||
| 27085 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoDV42ORF27085P |
| 27090 | protein ninB | |||
| 24545 | 101 aa hypothetical protein | |||
| 24550 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoDV42ORF24550P | |
| 24555 | 73 aa hypothetical protein | |||
| 17780 | DUF2556 domain-containing protein | |||
| 17785 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDV42ORF17785P |
| 17790 | Fis family transcriptional regulator | |||
| 22475 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoDV42ORF22480P | |
| 22490 | Eae protein | |||
| 10660 | cell division protein DamX | |||
| 10665 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDV42DamP |
| 10670 | ribulose-phosphate 3-epimerase | |||
| 9735 | 70 aa hypothetical protein | |||
| 9740 | M | M.Eco51306ORF7785P (100% identity) | M.EcoDV42ORF9740P | |
| 9745 | IS66 family transposase | |||
| 1630 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoDV42ORF1630P |
| 1635 | ATP-dependent helicase | |||
| 5150 | drug/metabolite exporter YedA | |||
| 5155 | V | V.EcosPA8DcmP (100% identity) | V.EcoDV42DcmP | |
| 5160 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDV42DcmP |
| 5165 | phosphohydrolase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25425 | NinE family protein | |||
| 25430 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoDV42ORF25430P |
| 25435 | recombination protein NinB | |||