Salmonella enterica subsp. enterica serovar Typhimurium PP_BR007 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium PP_BR007 RM systems
Ref: Panzenhagen,P.H.N. et al. unpublished
REBASE ref # 26580
Contig set: 4,841,010 bp
GenBank #: NPJP00000000 (NZ_NPJP00000000)
REBASE acronym: SenBR007
Org_num: 30054
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 545 | 93 aa hypothetical protein | |||
| 546 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenBR007ORFEP |
| 549 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenBR007ORFEP |
| ??? | R | hypothetical protein | GAGNNNNNNRTAYG | SenBR007ORFEP |
| 561 | 104 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | ead/Ea22-like family protein | |||
| 37 | M | M.StyTORF1914P (100% identity) | M.SenBR007ORFCP | |
| 41 | 70 aa hypothetical protein | |||
| 29 | Tryptophan--tRNA ligase | |||
| 32 | M | M.StyTDamP (100% identity) | GATC | M.SenBR007DamP |
| 33 | DamX protein | |||
| 28 | Carboxylate/amino acid/amine transporter | |||
| 29 | V | patch repair protein | V.SenBR007DcmP | |
| 30 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenBR007DcmP |
| 32 | 91 aa hypothetical protein | |||
| 63 | 64 aa hypothetical protein | |||
| 64 | R | SenS710ORF16210P (100% identity) | SenBR007ORFBP | |
| 65 | M | M.SenS710ORF16210P (100% identity) | M.SenBR007ORFBP | |
| 66 | 118 aa hypothetical protein | |||
| 52 | tRNA-dihydrouridine synthase B | |||
| 53 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenBR007ORFAP |
| 55 | 69 aa hypothetical protein | |||
| 52 | 127 aa hypothetical protein | |||
| 55 | M | M.StyUK1ORFAP (100% identity) | M.SenBR007ORFDP | |
| 61 | 113 aa hypothetical protein YPPY01_4745, partial | |||
| 447 | ATP-binding cassette domain-containing protein | |||
| 450 | RM | BREX-1 system adenine-specific DNA-methyltransferase PglX | SenBR007ORFFBP | |
| 453 | RM | restriction enzyme, methylase subunit | SenBR007ORFFAP | |
| 455 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23 | MFS transporter | |||
| 25 | M | type III restriction-modification system StyLTI enzyme mod | M.SenBR007ORFGP | |
| ??? | R | hypothetical protein | SenBR007ORFGP | |
| 30 | cytochrome d ubiquinol oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 560 | Uncharacterised protein | |||
| 562 | R | StyUK1MrrP (100% identity) | SenBR007MrrP | |
| 563 | 62 aa hypothetical protein | |||