Escherichia coli NCTC11023 |
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Putative Escherichia coli NCTC11023 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 4,705,041 bp
GenBank #: LS483297
REBASE acronym: Eco11023
Org_num: 29404
All begin NCTC11023_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2281 | IS3 element transposase | |||
| 2282 | M | M.SenSMo01ORF8345P (86% identity) | TCAGNNNNNNTGC | M.Eco11023ORF2282P |
| 2283 | S | S.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | S.Eco11023ORF2282P |
| 2284 | metal-binding protein | |||
| 2285 | R | SenSMo01ORF8345P (99% identity) | TCAGNNNNNNTGC | Eco11023ORF2282P |
| 2286 | hydrolase | |||
| 3977 | methylated adenine and cytosine restriction | |||
| 3978 | R | Ecos671ORFCP (99% identity) | CATNNNNNNCTCC | Eco11023IP |
| 3979 | M | M.SflFF12ORF17265P (100% identity) | CATNNNNNNCTCC | M.Eco11023I |
| 3980 | S | S.SflFF12ORF17265P (100% identity) | CATNNNNNNCTCC | S.Eco11023I |
| 3982 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 361 | DamX protein | |||
| 362 | M | DNA adenine methylase | GATC | M.Eco11023DamP |
| 363 | ribulose-phosphate 3-epimerase | |||
| 492 | membrane protein | |||
| 493 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco11023ORF493P |
| 494 | DNA-binding protein Fis | |||
| 1168 | TraR/DksA family transcriptional regulator | |||
| 1169 | M | M.EcoSCU306ORF6255P (100% identity) | GATC | M.Eco11023ORF1169P |
| 1170 | replication protein for prophage | |||
| 1867 | phosphohydrolase | |||
| 1868 | M | M.EcoTR01DcmP (99% identity) | CCWGG | M.Eco11023DcmP |
| 1869 | V | V.SflSTLE1DcmP (100% identity) | V.Eco11023DcmP | |
| 1870 | DMT superfamily transporter inner | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1334 | Uncharacterised protein | |||
| 1335 | M | M.Eco9032II (100% identity) | M.Eco11023ORF1335P | |
| 1336 | R | EcoMB64ORF6185P (100% identity) | Eco11023ORF1335P | |
| 1337 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3976 | GTP-binding protein YjiA | |||
| 3977 | R | Ssp28760MrrP (100% identity) | Eco11023MrrP | |
| 3978 | type I restriction enzyme EcoKI subunit R | |||
| 3980 | EcoKI restriction-modification system protein | |||
| 3982 | R | EcoTO6McrBP (100% identity) | Eco11023McrBP | |
| 3983 | R | Ssp28760McrCP (100% identity) | Eco11023McrCP | |