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Putative Actinobacillus pleuropneumoniae NCTC11384 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 2,335,264 bp
GenBank #: LS483358
REBASE acronym: Apl11384
Org_num: 29328
All begin NCTC11384_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
300 | DNA gyrase subunit A | |||
301 | M | M.AplM62ORF1490P (100% identity) | AACNNNNNNRTAC | M.Apl11384I |
302 | DNA-binding protein | |||
303 | Abortive infection bacteriophage resistance | |||
304 | Abortive infection bacteriophage resistance | |||
305 | S | S.AplM62ORF1490P (100% identity) | AACNNNNNNRTAC | S.Apl11384I |
306 | anticodon nuclease | |||
307 | R | AplM62ORF1490P (100% identity) | AACNNNNNNRTAC | Apl11384IP |
308 | ABC transporter ATPase | |||
1538 | phosphatidylserine decarboxylase | |||
1539 | R | AplM62ORF7585P (100% identity) | CCANNNNNNNNRTTG | Apl11384IIP |
1540 | M | M.AplM62ORF7585P (100% identity) | CCANNNNNNNNRTTG | M.Apl11384II |
1541 | DNA binding protein | |||
1542 | S | S1.AplM62ORF7585P (100% identity) | CCANNNNNNNNRTTG | S1.Apl11384II |
1543 | phage integrase/recombinase | |||
1544 | S | S2.AplM62ORF7585P (100% identity) | S2.Apl11384IIP | |
1545 | bifunctional glutamate--cysteine | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
198 | sodium-dependent transporter | |||
199 | M | M.AplS4074ORF995P (100% identity) | M.Apl11384ORF199P | |
200 | 3-dehydroquinate synthase | |||
610 | Replication protein P | |||
611 | M | M.AplM62ORF3000P (100% identity) | M.Apl11384ORF611P | |
612 | phage integrase/recombinase | |||
1037 | transposase | |||
??? | R | AplM62ORF5095P (100% identity) | GGATG | Apl11384IIIP |
1039 | M | M1.AplM62ORF5095P (100% identity) | GGATG | M1.Apl11384III |
1040 | M | M2.AplM62ORF5095P (100% identity) | GGATG | M2.Apl11384III |
1041 | Helix-turn-helix domain | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
625 | Protein of uncharacterised function (DUF2570) | |||
626 | M | M.AplM62ORF3075P (100% identity) | M.Apl11384ORF626P | |
627 | R | AplM62ORF3075P (100% identity) | Apl11384ORF626P | |
628 | YcaO-like family | |||
742 | HTH-type transcriptional regulator | |||
743 | M | M.AplM62ORF3650P (100% identity) | M.Apl11384ORF743P | |
744 | R | AplM62ORF3650P (100% identity) | Apl11384ORF743P | |
745 | ATP-dependent helicase | |||
790 | Uncharacterised protein | |||
791 | M | M.AplM62ORF3875P (100% identity) | M.Apl11384ORF791P | |
792 | R | AplM62ORF3875P (96% identity) | Apl11384ORF791P | |
793 | Xaa-Pro aminopeptidase | |||
891 | Terminase small subunit | |||
892 | M | M.Apl10ORF8660P (80% identity) | M.Apl11384ORF892P | |
893 | tRNA mo(5)U34 methyltransferase |