Escherichia coli O145 RM9872 |
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Putative Escherichia coli O145 RM9872 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 26546
Complete sequence: 5,385,924 bp
GenBank #: CP028379
REBASE acronym: Eco9872
Org_num: 29264
All begin I3Y_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13145 | metal-dependent hydrolase | |||
| 13150 | R | EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | Eco9872ORF13170P |
| 13155 | cold shock domain-containing protein | |||
| 13160 | YecA family protein | |||
| ??? | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.Eco9872ORF13170P |
| 13170 | M | M.EcoSO173ORF28895P (86% identity) | GATGNNNNNNTAC | M.Eco9872ORF13170P |
| 13175 | IS3-like element IS629 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4145 | recombination protein NinB | |||
| 4150 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco9872ORF4150P |
| 4155 | NinE family protein | |||
| 12780 | Shiga toxin Stx2 subunit A | |||
| 12800 | M | M.EcoE115ORF1522P (100% identity) | M.Eco9872ORF12800P | |
| 12805 | TrmB family transcriptional regulator | |||
| 13475 | drug/metabolite exporter YedA | |||
| 13480 | V | V.SsoSE61DcmP (100% identity) | V.Eco9872DcmP | |
| 13485 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco9872DcmP |
| 13490 | phosphohydrolase | |||
| 21100 | Fis family transcriptional regulator | |||
| 21105 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco9872ORF21105P |
| 21110 | DUF2556 domain-containing protein | |||
| 21650 | ribulose-phosphate 3-epimerase | |||
| 21655 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9872DamP |
| 21660 | protein DamX | |||
| 25020 | 77 aa hypothetical protein | |||
| 25025 | M | M.SflFF35ORF20P (100% identity) | M.Eco9872ORF25025P | |
| 25030 | 330 aa hypothetical protein | |||
| 27465 | ATP-dependent helicase | |||
| 27470 | RM | EcoE115ORF5155P (100% identity) | Eco9872ORF27470P | |