Escherichia coli VH1 |
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Putative Escherichia coli VH1 RM systems
Ref: Liu,B.-T. and Song,F.-J. unpublished
REBASE ref # 26691
Complete sequence: 4,445,870 bp
GenBank #: CP028704
REBASE acronym: EcoVH1
Org_num: 29241
All begin DBK97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19860 | Mrr restriction system protein | |||
| 19865 | R | EcoWF55T2ORF18815P (100% identity) | AACNNNNNNGTGC | EcoVH1ORF19870P |
| 19870 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoVH1ORF19870P |
| 19875 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoVH1ORF19870P |
| 19880 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2670 | Fis family transcriptional regulator | |||
| 2675 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoVH1ORF2675P |
| 2680 | DUF2556 domain-containing protein | |||
| 3340 | ribulose-phosphate 3-epimerase | |||
| 3345 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoVH1DamP |
| 3350 | protein DamX | |||
| 9410 | phosphohydrolase | |||
| 9415 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoVH1DcmP |
| 9420 | V | V.SflFF64DcmP (100% identity) | V.EcoVH1DcmP | |
| 9425 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19855 | GTPase | |||
| 19860 | R | SenHNK130MrrP (100% identity) | EcoVH1MrrP | |
| 19865 | type I restriction-modification system | |||
| 19880 | endoribonuclease SymE | |||
| 19885 | R | EcotolCMcrBP (100% identity) | EcoVH1McrBP | |
| 19890 | R | SenHNK130McrCP (100% identity) | EcoVH1McrCP | |
| 19895 | 906 aa hypothetical protein | |||