Escherichia coli O26 RM10386 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O26 RM10386 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 26546
| Sequence length: | GenBank #: | |
| Chromosome: | 5,785,882 bp | CP028126 |
| plasmid pRM10386-1: | 98,899 bp | CP028125 |
| plasmid pRM10386-2: | 83,012 bp | CP028124 |
REBASE acronym: Eco10386
Org_num: 29095
All begin I3U_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 32290 | endoribonuclease SymE | |||
| 32295 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco10386I |
| ??? | M | M.EcoO26ORF5541P (100% identity) | TACNNNNNNNRTRTC | M.Eco10386I |
| 32305 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco10386IP |
| 32310 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10185 | recombination protein NinB | |||
| 10190 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco10386ORF10190P |
| 10195 | NinE family protein | |||
| 16760 | drug/metabolite exporter YedA | |||
| 16765 | V | V.SflSTLE3DcmP (100% identity) | V.Eco10386DcmP | |
| 16770 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco10386DcmP |
| 16775 | HD domain-containing protein | |||
| 18715 | NinE family protein | |||
| 18720 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco10386ORF18720P |
| 18725 | recombination protein NinB | |||
| 19700 | LexA family transcriptional repressor | |||
| 19705 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco10386II |
| 19710 | R | Sso1099IP (100% identity) | CTGCAG | Eco10386IIP |
| 19715 | 215 aa hypothetical protein | |||
| 19825 | regulator | |||
| 19830 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco10386ORF19830P |
| 19835 | DUF1382 domain-containing protein | |||
| 21285 | PerC family transcriptional regulator | |||
| 21290 | M | M.EcoTCM3e1ORF6790P (100% identity) | M.Eco10386ORF21290P | |
| 21295 | serine/threonine protein phosphatase | |||
| 22155 | LexA family transcriptional regulator | |||
| 22160 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.Eco10386ORF22160P |
| 22165 | PerC family transcriptional regulator | |||
| 25755 | Fis family transcriptional regulator | |||
| 25760 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco10386ORF25760P |
| 25765 | DUF2556 domain-containing protein | |||
| 26360 | ribulose-phosphate 3-epimerase | |||
| 26365 | M | DNA adenine methylase | GATC | M.Eco10386DamP |
| 26370 | protein DamX | |||
| plasmid pRM10386-1 | ||||
| 570 | recombination-associated protein RdgC | |||
| 575 | M | M.EcoMBT5ORF29545P (100% identity) | M.Eco10386ORF575P | |
| 595 | 143 aa hypothetical protein | |||
| plasmid pRM10386-2 | ||||
| 285 | 0 aa hypothetical protein | |||
| 290 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco10386ORF290P |
| 295 | 72 aa hypothetical protein | |||