Salmonella enterica subsp. enterica serovar Typhimurium Q1 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium Q1 RM systems
Ref: Eichhorn,I. et al. unpublished
REBASE ref # 25761
Contig set: 4,793,493 bp
GenBank #: NNSK00000000 (NZ_NNSK00000000)
REBASE acronym: SenQ1
Org_num: 27937
All begin CHH29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11375 | restriction endonuclease | |||
| 11380 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenQ1ORF11385P |
| 11385 | M | M.SenLT1ORF5320P (100% identity) | GAGNNNNNNRTAYG | M.SenQ1ORF11385P |
| 11390 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenQ1ORF11385P |
| 11395 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14295 | DUF2556 domain-containing protein | |||
| 14300 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenQ1ORF14300P |
| 14305 | Fis family transcriptional regulator | |||
| 6260 | drug/metabolite exporter YedA | |||
| 6265 | V | V.StyUK1DcmP (100% identity) | V.SenQ1DcmP | |
| 6270 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenQ1DcmP |
| 6275 | phosphohydrolase | |||
| 18195 | PerC family transcriptional regulator | |||
| 18200 | M | M.StyUK1V (100% identity) | GATC | M.SenQ1ORF18200P |
| 18205 | RusA family crossover junction | |||
| 13520 | ribulose-phosphate 3-epimerase | |||
| 13525 | M | M.StyTDamP (100% identity) | GATC | M.SenQ1DamP |
| 13530 | cell division protein DamX | |||
| 11555 | DNA repair protein | |||
| 11560 | RM | StyUK1IV (100% identity) | GATCAG | SenQ1ORF11560P |
| 11565 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15175 | 33 aa hypothetical protein | |||
| 15180 | R | StyUK1IP (99% identity) | CAGAG | SenQ1ORF15185P |
| 15185 | M | M.StyUK1I (100% identity) | CAGAG | M.SenQ1ORF15185P |
| 15190 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11370 | 95 aa hypothetical protein | |||
| 11375 | R | StyUK1MrrP (100% identity) | SenQ1MrrP | |
| 11380 | type I restriction-modification system | |||