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Putative Escherichia coli ARS-CC5555 RM systems
Ref: Kim,S.-W. et al. unpublished
REBASE ref # 25612
Contig set: 5,293,508 bp
GenBank #: NFRB00000000 (NZ_NFRB00000000)
REBASE acronym: Eco5555
Org_num: 27186
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
718 | 82 aa hypothetical protein | |||
719 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco5555ORFGP |
722 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco5555ORFGP |
724 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco5555ORFGP |
726 | type I restriction-modification system deoxyribonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
9 | 66 aa hypothetical protein EC990816_1660 | |||
10 | M | M.EcoNE92ORF14960P (100% identity) | M.Eco5555ORFEP | |
13 | 116 aa hypothetical protein CFI09_14245 | |||
19 | prophage protein ninB | |||
22 | M | M.EcoC3108ORFMP (100% identity) | M.Eco5555ORFDP | |
27 | 64 aa hypothetical protein | |||
25 | 59 aa hypothetical protein SFxv_3614 | |||
26 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco5555ORFBP |
27 | tRNA-dihydrouridine synthase B | |||
31 | HD domain protein | |||
32 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco5555DcmP |
34 | V | V.EcoPT54DcmP (100% identity) | V.Eco5555DcmP | |
38 | YedA | |||
78 | 120 aa hypothetical protein SAMN04487773_1787 | |||
79 | R | Ecos32ORF15460P (100% identity) | Eco5555ORFCP | |
82 | M | M.Ecos32ORF15460P (100% identity) | M.Eco5555ORFCP | |
85 | 62 aa hypothetical protein | |||
121 | DNA methylase family protein, partial | |||
123 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco5555ORFHP | |
126 | 101 aa hypothetical protein WKY_01100 | |||
143 | 90 aa hypothetical protein | |||
??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco5555ORFFP | |
150 | 116 aa hypothetical protein | |||
470 | cell division protein DamX | |||
473 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5555DamP |
475 | Tryptophan--tRNA ligase | |||
846 | 138 aa hypothetical protein | |||
847 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco5555ORFAP |
855 | DUF1998 domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
729 | 81 aa hypothetical protein Ec53638_1442 | |||
730 | R | EcoX21GmrDP (100% identity) | Eco5555GmrDP | |
731 | R | Ecos1613GmrSP (100% identity) | Eco5555GmrSP | |
732 | 61 aa hypothetical protein |