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Putative Raoultella planticola FDAARGOS_429 RM systems
Ref: Croxen,M. et al. unpublished
REBASE ref # 25299
Sequence length: | GenBank #: | |
Chromosome: | 5,616,089 bp | CP023874 |
plasmid unnamed: | 262,185 bp | CP023875 |
REBASE acronym: Rpl429
Org_num: 26388
All begin CRT62_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
23730 | IS3 family transposase | |||
23735 | M | M.Rpl430I (100% identity) | TTCANNNNNNTCG | M.Rpl429I |
23740 | S | S.Rpl430I (100% identity) | TTCANNNNNNTCG | S.Rpl429I |
23745 | R | Rpl430IP (100% identity) | TTCANNNNNNTCG | Rpl429IP |
23750 | 197 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1395 | cell division protein DamX | |||
1400 | M | M.RplzwDamP (100% identity) | GATC | M.Rpl429DamP |
1405 | ribulose-phosphate 3-epimerase | |||
6705 | NinG family protein | |||
6710 | M | M.Rpl430ORF910P (100% identity) | GATC | M.Rpl429ORF6710P |
6715 | antitermination protein | |||
8980 | phosphohydrolase | |||
8985 | M | M.RplGODADcmP (100% identity) | M.Rpl429DcmP | |
8990 | V | V.Rpl430DcmP (100% identity) | V.Rpl429DcmP | |
8995 | drug/metabolite exporter YedA | |||
10935 | 232 aa hypothetical protein | |||
10940 | M | M.Rpl430ORF23910P (100% identity) | M.Rpl429ORF10940P | |
10945 | 166 aa hypothetical protein | |||
18070 | DUF1133 domain-containing protein | |||
18075 | M | M.Rpl430ORF16770P (100% identity) | GATC | M.Rpl429ORF18075P |
18080 | 197 aa hypothetical protein | |||
23675 | SH3 domain-containing protein | |||
23680 | R | Rpl430ORF11165P (100% identity) | Rpl429ORF23680P | |
23685 | RES domain-containing protein | |||
plasmid unnamed | ||||
27325 | 64 aa hypothetical protein | |||
27330 | M | M.Rpl428ORF15P (100% identity) | M.Rpl429ORF27330P | |
27335 | 73 aa hypothetical protein | |||
27560 | resolvase | |||
27565 | R | YpsR1ORFAP (99% identity) | CCWGG | Rpl429ORF27570P |
27570 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Rpl429ORF27570P |
27575 | IS1 family transposase | |||
28295 | 76 aa hypothetical protein | |||
28300 | M | M.Sne174ORF27605P (100% identity) | M.Rpl429ORF28300P | |
28305 | 73 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17040 | integrase | |||
17045 | M | M.Rpl430II (100% identity) | CAAACC | M.Rpl429II |
17050 | R | Rpl430IIP (100% identity) | CAAACC | Rpl429IIP |
17055 | shufflon system plasmid conjugative transfer |