Escherichia coli NCCP15648 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NCCP15648 RM systems
Ref: Kim,J.F. et al. unpublished
REBASE ref # 24976
| Sequence length: | GenBank #: | |
| Chromosome: | 5,329,605 bp | CP009050 |
| plasmid p15648-1: | 97,258 bp | CP009051 |
| plasmid p15648-2: | 83,860 bp | CP009052 |
REBASE acronym: Eco15648
Org_num: 25453
All begin A610_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5115 | SymE_toxin domain containing protein | |||
| 5116 | S | S.SspS13ORF3945P (100% identity) | S.Eco15648ORF5117P | |
| 5117 | M | M.SspS13ORF3945P (100% identity) | M.Eco15648ORF5117P | |
| 5118 | R | SspS13ORF3945P (100% identity) | Eco15648ORF5117P | |
| 5119 | DUF262 multi-domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1098 | DUF1382 domain containing protein | |||
| 1099 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.Eco15648ORF1099P |
| 1100 | Unassigned protein | |||
| 1117 | Phage regulatory protein, Rha family | |||
| 1118 | R | Sso1099IP (100% identity) | CTGCAG | Eco15648ORF1119P |
| 1119 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco15648ORF1119P |
| 1120 | Repressor protein CI | |||
| 1521 | Unassigned protein | |||
| 1522 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco15648ORF1522P |
| 1526 | Unassigned protein | |||
| 2235 | Unassigned protein | |||
| 2238 | M | M.Sso1093ORF10290P (99% identity) | A | M.Eco15648ORF2238P |
| 2239 | Unassigned protein | |||
| 2321 | LexA repressor | |||
| 2322 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco15648ORF2322P |
| 2323 | Unassigned protein | |||
| 2480 | Permeases of the drug/metabolite transporter | |||
| 2481 | V | V.SsoSE61DcmP (100% identity) | V.Eco15648DcmP | |
| 2482 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco15648DcmP |
| 2483 | HD superfamily hydrolase | |||
| 3937 | global DNA-binding transcriptional dual | |||
| 3938 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco15648ORF3938P |
| 3939 | DUF2556 domain containing protein | |||
| 4049 | D-ribulose-5-phosphate 3-epimerase | |||
| 4050 | M | DNA adenine methylase | GATC | M.Eco15648DamP |
| 4051 | SPOR domain containing protein | |||
| plasmid p15648-1 | ||||
| 5233 | recombination associated protein | |||
| 5234 | M | M.Eco186ORF26955P (99% identity) | M.Eco15648ORF5234P | |
| 5238 | serine protease | |||
| plasmid p15648-2 | ||||
| 5298 | DUF1281 domain containing protein | |||
| 5299 | M | M.SsoST152ORF25555P (100% identity) | M.Eco15648ORF5299P | |
| 5300 | Unassigned protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3561 | Peptidase_S8 domain containing protein | |||
| 3562 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco15648ORF3562P |
| 3563 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco15648ORF3562P |
| 3564 | Unassigned protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5112 | DUF1127 domain containing protein | |||
| 5113 | R | SflLIN8GmrSDP (34% identity) | Eco15648GmrSP | |
| 5114 | R | EcoM1887GmrSDP (65% identity) | Eco15648GmrDP | |
| 5115 | SymE_toxin domain containing protein | |||