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Putative Listeria monocytogenes RM systems
Ref: Moura,A. unpublished
REBASE ref # 24454
Sequence length: | GenBank #: | |
Chromosome: | (contig set) | FWPO00000000 |
Chromosome: | (contig set) | FWPR00000000 |
Chromosome: | (contig set) | FWPS00000000 |
chromosome 1: | 2,913,696 bp | LT985475 |
chromosome 1: | 2,935,970 bp | LT985476 |
chromosome 1: | 2,900,890 bp | LT985474 |
REBASE acronym:
Org_num: 24424
All begin LMJF5203_, LMJF5861_, LMLMNC088_, ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
325 | ROK family protein | |||
326 | R | LmoNG2ORFCP (100% identity) | LmoNG1ORFAP | |
327 | M | M.Lmos8100ORF13015P (100% identity) | M.LmoNG1ORFAP | |
329 | S | S1.LmoNG2ORFCP (100% identity) | S1.LmoNG1ORFAP | |
330 | Phage integrase family protein | |||
331 | S | S2.LmoNG2ORFCP (100% identity) | S2.LmoNG1ORFAP | |
332 | 6-phospho-beta-glucosidase | |||
Chromosome | ||||
84 | ROK family protein | |||
85 | R | LmoNG1ORFAP (100% identity) | LmoNG2ORFCP | |
86 | M | M.Lmos8100ORF13015P (100% identity) | M.LmoNG2ORFCP | |
88 | S | S1.LmoNG1ORFAP (100% identity) | S1.LmoNG2ORFCP | |
89 | Phage integrase family protein | |||
90 | S | S2.LmoNG1ORFAP (100% identity) | S2.LmoNG2ORFCP | |
91 | 6-phospho-beta-glucosidase | |||
chromosome 1 | ||||
558 | transcriptional regulator | |||
559 | R | LmoNG2ORFCP (100% identity) | Lmo5861ORF560P | |
560 | M | M.Lmos8100ORF13015P (100% identity) | M.Lmo5861ORF560P | |
561 | S | S1.LmoORF544P (100% identity) | S1.Lmo5861ORF560P | |
562 | integrase | |||
563 | S | S3.Lmos15ORF2290P (100% identity) | TACBNNNNNNGTNG | S2.Lmo5861ORF560P |
564 | 6-phospho-beta-glucosidase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
430 | Gp42 | |||
431 | M | M.Lmos15ORF12240P (100% identity) | M.LmoNG1ORFBP | |
433 | Gp49 | |||
Chromosome | ||||
75 | Nuclease-like protein | |||
76 | M | M.LmoPZHORF291P (100% identity) | M.LmoNG2ORFAP | |
77 | Uncharacterized protein | |||
373 | Gp42 | |||
374 | M | M.Lmos15ORF12240P (100% identity) | M.LmoNG2ORFDP | |
376 | Gp49 | |||
Chromosome | ||||
397 | 75 aa hypothetical protein | |||
399 | M | M.Lmo2HF15ORFCP (98% identity) | M.LmoNG3ORFAP | |
401 | 71 aa hypothetical protein | |||
chromosome 1 | ||||
700 | 138 aa hypothetical protein | |||
701 | M | M.LmoORF679P (100% identity) | M.Lmo5861ORF701P | |
702 | R | LmoLM42ORF2213P (100% identity) | Lmo5861ORF701P | |
703 | 330 aa hypothetical protein | |||
chromosome 1 | ||||
325 | threonine aldolase | |||
326 | M | M.LmoSHL9ORF12051P (100% identity) | GATC | M.Lmo88ORF326P |
327 | R | LmoSHL9ORF12051P (100% identity) | GATC | Lmo88ORF326P |
328 | PTS cellbiose transporter subunit IIC | |||
2738 | 122 aa hypothetical protein | |||
2739 | R | LmoB4271ORF852P (100% identity) | Lmo88ORF2740P | |
2740 | M | M.LmoB4271ORF852P (100% identity) | M.Lmo88ORF2740P | |
2741 | 304 aa hypothetical protein | |||
chromosome 1 | ||||
338 | PTS beta-glucoside transporter subunit IIA | |||
339 | R | Lmos18ORF1225P (100% identity) | GATC | Lmo52031ORF341P |
340 | transcriptional regulator | |||
341 | M | M.Lmos18ORF1225P (100% identity) | GATC | M.Lmo52031ORF341P |
342 | HNH endonuclease | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
101 | 75 aa hypothetical protein | |||
102 | M | M.LmoLm218ORF2860P (100% identity) | M.LmoNG2ORFBP | |
104 | R | LmoPZHORF221P (100% identity) | LmoNG2ORFBP | |
105 | Toxin-antitoxin system, toxin component, RelE family | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
143 | Lmo0301 protein | |||
144 | R | LmoSHL1MrrP (97% identity) | LmoNG3MrrP | |
145 | DNA helicase related protein |