Escherichia coli MEM |
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Putative Escherichia coli MEM RM systems
Ref: Liu,B. unpublished
REBASE ref # 24428
Complete sequence: 4,928,082 bp
GenBank #: CP012378
REBASE acronym: EcoMEM
Org_num: 24397
All begin AKN40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1177 | GCN5-related N-acetyltransferase | |||
| 1178 | M | M.EcoW102ORF5655P (100% identity) | M.EcoMEMORF1178P | |
| 1179 | S | S.EcoW102ORF5655P (100% identity) | S.EcoMEMORF1178P | |
| 1180 | R | EcoW102ORF5655P (100% identity) | EcoMEMORF1178P | |
| 1181 | 164 aa hypothetical protein | |||
| 1988 | 410 aa hypothetical protein | |||
| 1989 | M | M.EcoYPE12ORF11395P (100% identity) | M.EcoMEMORF1989P | |
| 1990 | S | S1.EcoAWORFDP (62% identity) | S.EcoMEMORF1989P | |
| 1991 | 227 aa hypothetical protein | |||
| 1992 | R | EcoGS04ORF3840P (99% identity) | EcoMEMORF1989P | |
| 1993 | 251 aa hypothetical protein | |||
| 4309 | methylated adenine and cytosine restriction | |||
| 4310 | R | EcoW102ORF20700P (100% identity) | EcoMEMORF4311P | |
| 4311 | M | M.EcoW102ORF20700P (100% identity) | M.EcoMEMORF4311P | |
| 4312 | S | S.EcoW102ORF20700P (100% identity) | S.EcoMEMORF4311P | |
| 4313 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 374 | 428 aa hypothetical protein | |||
| 375 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMEMDamP |
| 376 | ribulose-phosphate 3-epimerase | |||
| 504 | 37 aa hypothetical protein | |||
| 505 | M | M.EcoW102ORF2375P (100% identity) | ATGCAT | M.EcoMEMORF505P |
| 506 | DNA-binding protein fis | |||
| 1920 | 231 aa hypothetical protein | |||
| 1921 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoMEMDcmP |
| 1922 | V | V.SsoSE61DcmP (100% identity) | V.EcoMEMDcmP | |
| 1923 | 306 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1887 | PilV-like protein | |||
| 1888 | R | Eco761ORFBP (99% identity) | EcoMEMORF1888P | |
| 1889 | site-specific DNA-methyltransferase, component | |||
| 1888 | type III restriction system endonuclease | |||
| 1889 | M | M.KquC3001ORF9710P (98% identity) | CCGAG | M.EcoMEMORF1889P |
| 1890 | transposase, IS4 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4308 | GTP-binding protein YjiA | |||
| 4309 | R | Ssp28760MrrP (100% identity) | EcoMEMMrrP | |
| 4310 | type I restriction enzyme EcoKI subunit R | |||
| 4313 | endoribonuclease SymE | |||
| 4314 | R | EcoW102McrB2P (100% identity) | EcoMEMMcrBP | |
| 4315 | R | EcoW102McrC2P (98% identity) | EcoMEMMcrCP | |
| 4316 | 982 aa hypothetical protein | |||