Escherichia coli APEC O2 |
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Putative Escherichia coli APEC O2 RM systems
Ref: Kurirkiene,E. and Olsen,R. unpublished
REBASE ref # 24054
Contig set: 4,908,820 bp
GenBank #: LSZR00000000 (NZ_LSZR00000000)
REBASE acronym: EcoAPEC2
Org_num: 24143
All begin AZE29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7585 | transposase | |||
| 7590 | R | EcoF1022ORF7700P (100% identity) | EcoAPEC2ORF7600P | |
| 7595 | S | S.EcoF1022ORF7700P (100% identity) | S.EcoAPEC2ORF7600P | |
| 7600 | M | M.EcoF1022ORF7700P (100% identity) | M.EcoAPEC2ORF7600P | |
| 7605 | 50S ribosome-binding GTPase | |||
| 17835 | 113 aa hypothetical protein | |||
| 17840 | S | S.EcoBP231ORF18960P (100% identity) | S.EcoAPEC2ORF17845P | |
| 17845 | M | M.Eco669ORF10270P (100% identity) | M.EcoAPEC2ORF17845P | |
| 17850 | R | EcosLF82ORF3455P (100% identity) | EcoAPEC2ORF17845P | |
| 17855 | 477 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18605 | hydrolase | |||
| 18610 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoAPEC2DcmP |
| 18615 | V | V.SflC32DcmP (74% identity) | V.EcoAPEC2DcmP | |
| 18620 | drug/metabolite exporter YedA | |||
| 22345 | transactivation protein | |||
| 22350 | M | M.EcoSC477ORFDP (100% identity) | M.EcoAPEC2ORF22350P | |
| 22355 | transposase | |||
| 20680 | 162 aa hypothetical protein | |||
| 20685 | M | M.EcosA32ORF3630P (100% identity) | GATC | M.EcoAPEC2ORF20685P |
| 20690 | crossover junction endodeoxyribonuclease | |||
| 19305 | transposase | |||
| ??? | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoAPEC2ORFAP |
| 19320 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoAPEC2ORFAP |
| 19325 | IS2 repressor TnpA | |||
| 11570 | 64 aa hypothetical protein | |||
| 11575 | M | M.Ecod58ORF11615P (98% identity) | M.EcoAPEC2ORF11575P | |
| 11580 | transcriptional regulator | |||
| 8020 | cell division protein DamX | |||
| 8025 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoAPEC2DamP |
| 8030 | ribulose phosphate epimerase | |||
| 2675 | 318 aa hypothetical protein | |||
| 2680 | M | M.EcoSCU109ORF25P (100% identity) | M.EcoAPEC2ORF2680P | |
| 2685 | Presumed portal vertex protein | |||
| 1695 | Fis family transcriptional regulator | |||
| 1700 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoAPEC2ORF1700P |
| 1705 | 59 aa hypothetical protein | |||