Salmonella enterica subsp. enterica serovar Typhimurium CCRJ_26 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CCRJ_26 RM systems
Ref: Panzenhagen,P.H. et al. unpublished
REBASE ref # 24048
Contig set: 4,987,640 bp
GenBank #: MVJI00000000 (NZ_MVJI00000000)
REBASE acronym: SenCCRJ26
Org_num: 24137
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 326 | 104 aa hypothetical protein | |||
| 328 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenCCRJ26ORFHP |
| 334 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenCCRJ26ORFHP |
| 340 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenCCRJ26ORFHP |
| 341 | 93 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7 | Uncharacterized protein | |||
| 10 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.SenCCRJ26ORFEP |
| 16 | Uncharacterized protein | |||
| 10 | Uncharacterized protein | |||
| 12 | M | M.YpsF1ORFCP (100% identity) | M.SenCCRJ26ORFBP | |
| 15 | Nuclease-like protein | |||
| 10 | DNA-binding protein | |||
| 11 | M | M.YpsF1ORFDP (100% identity) | M.SenCCRJ26ORFLP | |
| 12 | Uncharacterized protein | |||
| 21 | Phage protein | |||
| 23 | M | M.Sens29958ORF6205P (100% identity) | M.SenCCRJ26ORFCP | |
| 26 | 100 aa hypothetical protein | |||
| 20 | 102 aa hypothetical protein | |||
| 23 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenCCRJ26ORFGP |
| 25 | 98 aa hypothetical protein | |||
| 48 | 238 aa hypothetical protein | |||
| 51 | M | M.YpsF1ORFBP (61% identity) | M.SenCCRJ26ORFJP | |
| 84 | Permease of the drug/metabolite transporter DMT | |||
| 85 | V | V.StyUK1DcmP (100% identity) | V.SenCCRJ26DcmP | |
| 86 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenCCRJ26DcmP |
| 88 | 91 aa hypothetical protein | |||
| 418 | 61 aa hypothetical protein | |||
| 420 | RM | StyUK1IV (92% identity) | SenCCRJ26ORFIP | |
| 423 | ABC-type transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 39 | Uncharacterized protein | |||
| 41 | R | StyUK1IP (100% identity) | CAGAG | SenCCRJ26ORFFP |
| 43 | M | M.StyUK1I (100% identity) | CAGAG | M.SenCCRJ26ORFFP |
| 44 | Uncharacterized protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 324 | 62 aa hypothetical protein | |||
| 325 | R | StyUK1MrrP (100% identity) | SenCCRJ26MrrP | |
| 327 | 266 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9 | Ribulose-phosphate 3-epimerase | |||
| 11 | M | M.StyTDamP (100% identity) | GATC | M.SenCCRJ26ORFDP |
| 12 | Cell division protein DamX | |||