Escherichia coli 16309 |
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Putative Escherichia coli 16309 RM systems
Ref: Asakura,H. et al. unpublished
REBASE ref # 23720
Contig set: 5,404,906 bp
GenBank #: BDLM00000000 (NZ_BDLM00000000)
REBASE acronym: Eco16309
Org_num: 23061
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 39 | Restriction endonuclease family protein | |||
| 40 | M | M.Eco38C15ORF12050P (100% identity) | M.Eco16309ORFBP | |
| 43 | S | S.Eco18C12ORF19140P (100% identity) | S.Eco16309ORFBP | |
| 45 | R | Ecost88ORF20845P (99% identity) | Eco16309ORFBP | |
| 49 | Endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8 | 68 aa hypothetical protein | |||
| 10 | M | M.Eco06ORF8325P (94% identity) | M.Eco16309ORFKP | |
| 12 | Uncharacterized protein | |||
| 7 | 88 aa hypothetical protein | |||
| ??? | M | M.Eco06K7ORF12570P (98% identity) | M.Eco16309ORFAP | |
| 11 | 66 aa hypothetical protein | |||
| 7 | Uncharacterized protein | |||
| 10 | M | M.EcoRM9088ORF1010P (100% identity) | SAY | M.Eco16309ORFIP |
| 15 | Uncharacterized protein | |||
| 7 | cytoplasmic protein | |||
| 9 | M | M.Ecoppa9ORF24505P (100% identity) | SAY | M.Eco16309ORFJP |
| 16 | Uncharacterized protein | |||
| 18 | Uncharacterized protein | |||
| 20 | M | M.Sso63633ORF22325P (100% identity) | GATC | M.Eco16309ORFHP |
| 24 | LexA DNA binding domain protein | |||
| 18 | 90 aa hypothetical protein | |||
| 21 | M | M.EcosA32ORF3630P (100% identity) | GATC | M.Eco16309ORFDP |
| 26 | 81 aa hypothetical protein | |||
| 32 | HD domain protein | |||
| 33 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco16309DcmP |
| 35 | V | V.Ecod6c8DcmP (99% identity) | V.Eco16309DcmP | |
| 39 | Carboxylate/Amino Acid/Amine Transporter | |||
| 73 | Phage replication protein | |||
| 78 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco16309ORFEP |
| 79 | Phage/conjugal plasmid C-4 type zinc finger protein, TraR family | |||
| 79 | Uncharacterized protein | |||
| 85 | M | M.EcoSTEC1080ORF13995P (99% identity) | M.Eco16309ORFCP | |
| 87 | 196 aa hypothetical protein | |||
| 82 | Uncharacterized protein | |||
| 83 | M | M.EspP079ORF1170P (100% identity) | M.Eco16309ORFGP | |
| 85 | 74 aa hypothetical protein | |||
| 126 | Ribulose-phosphate 3-epimerase | |||
| 127 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco16309DamP |
| 130 | Cell division protein DamX | |||
| 1090 | 98 aa hypothetical protein | |||
| 1091 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco16309ORFFP |
| 1092 | Uncharacterized protein | |||