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Putative Campylobacter helveticus ATCC 51209 RM systems
Ref: Miller,W.G. et al. unpublished
REBASE ref # 24464
Complete sequence: 1,758,726 bp
GenBank #: CP020478
REBASE acronym: Che51209
Org_num: 23888
All begin CHELV3228_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
731 | 1224 aa hypothetical protein | |||
732 | M | M.Che12470VI (100% identity) | ATCNNNNNNCTC | M.Che51209VI |
733 | S | S.Che12470VI (100% identity) | ATCNNNNNNCTC | S.Che51209VI |
734 | R | Che12470VIP (100% identity) | ATCNNNNNNCTC | Che51209VIP |
735 | UDP-N-acetylmuramate-alanine ligase | |||
1771 | 253 aa hypothetical protein (DUF541 domain) | |||
??? | S | type I restriction-modification system specificity subunit S | S1.Che51209ORF1776P | |
??? | S | S.Csp25113ORF1607P (42% identity) | S2.Che51209ORF1776P | |
1777 | gamma carbonic anhydrase family protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
16 | N-acetyl-gamma-glutamylphosphate reductase | |||
17 | R | Che12470ORF33P (100% identity) | GGATG | Che51209ORF18P |
18 | M | M1.Che12470ORF33P (100% identity) | GGATG | M1.Che51209ORF18P |
19 | M | M2.Che12470ORF33P (100% identity) | GGATG | M2.Che51209ORF18P |
20 | adenine-specific DNA methyltransferase (EcoRI | |||
19 | adenine-specific DNA methyltransferase | |||
20 | M | M.Che12470I (100% identity) | RAATTY | M.Che51209III |
21 | R | Che12470IP (100% identity) | RAATTY | Che51209IIIP |
22 | DNA topoisomerase I | |||
132 | molybdopterin synthase, small subunit | |||
133 | R | Che12470IVP (100% identity) | GGNCC | Che51209VIIP |
134 | M | M.Che12470IV (100% identity) | GGNCC | M.Che51209VII |
135 | copper oxidase | |||
253 | imidazoleglycerol-phosphate dehydratase / | |||
254 | M | M.Che12470ORF273P (100% identity) | GATC | M.Che51209I |
255 | R | Che12470ORF273P (100% identity) | GATC | Che51209IP |
256 | imidazole glycerol phosphate synthase HisFH, | |||
316 | 50S ribosomal protein L9 | |||
317 | RM | Che12470ORF336P (100% identity) | Che51209ORF317P | |
318 | heat shock protein HslVU, ATP-dependent protease | |||
390 | GMP synthase (acetyltransferase domains) | |||
391 | R | Che9613ORF4880P (94% identity) | Che51209ORF392P | |
392 | M | M.Che9613ORF4880P (100% identity) | CATG | M.Che51209ORF392P |
393 | DNA polymerase I, 5 --> 3 polymerase, 5 --> | |||
831 | 172 aa hypothetical protein | |||
832 | M | M.Che12470ORF868P (100% identity) | M.Che51209ORF832P | |
833 | R | Cup6824ORF3270P (94% identity) | Che51209ORF832P | |
834 | phosphate ABC transporter, periplasmic | |||
879 | 204 aa hypothetical protein | |||
880 | RM | Che12470ORF920P (99% identity) | Che51209ORF880P | |
881 | MatE efflux family protein | |||
918 | 429 aa hypothetical protein | |||
919 | M | M.Che12470III (100% identity) | GANTC | M.Che51209II |
920 | R | Che12470IIIP (100% identity) | GANTC | Che51209IIP |
921 | molybdenum cofactor guanylyltransferase protein | |||
933 | tRNA m5U54 methyltransferase | |||
934 | RM | Che12470ORF977P (100% identity) | Che51209ORF934P | |
935 | pseudogene | |||
1231 | 471 aa hypothetical protein | |||
1232 | M | M.Che12470II (98% identity) | ACNGT | M.Che51209IV |
1233 | 249 aa hypothetical protein | |||
1234 | 407 aa hypothetical protein | |||
1235 | R | Che12470IIP (100% identity) | ACNGT | Che51209IVP |
1236 | chorismate mutase / prephenate dehydratase | |||
1233 | 249 aa hypothetical protein | |||
1234 | M | M.Che12470ORF1292P (100% identity) | CCWGG | M.Che51209ORF1234P |
1235 | type II restriction endonuclease | |||
1281 | thiamin biosynthesis protein | |||
1282 | RM | Cup11840ORF628P (69% identity) | Che51209ORFAP | |
1283 | N-succinyl-diaminopimelate deacylase | |||
1487 | pseudogene | |||
1488 | R | Che12470ORF1558P (99% identity) | Che51209ORF1489P | |
1489 | M | M.Che12470ORF1558P (100% identity) | GTAC | M.Che51209ORF1489P |
1490 | thioredoxin | |||
1540 | peptide chain release factor 1 | |||
1541 | R | Che12470ORF1611P (100% identity) | GAAGA | Che51209ORF1542P |
1542 | M | M1.Che12470ORF1611P (100% identity) | GAAGA | M1.Che51209ORF1542P |
1543 | M | M2.Che12470ORF1611P (100% identity) | GAAGA | M2.Che51209ORF1542P |
1544 | formyltransferase domain-containing protein | |||
1554 | 16S rRNA m7G527 methyltransferase | |||
1555 | RM | Che12470ORF1625P (100% identity) | Che51209ORF1555P | |
1556 | acetyl-CoA carboxylase, biotin carboxylase | |||
1603 | 71 aa hypothetical protein | |||
1604 | M | M.Che9613ORF8105P (98% identity) | CCGG | M.Che51209V |
1605 | GTP-binding protein | |||
1824 | 23S rRNA pseudouridine 2605 synthase | |||
1825 | M | M1.HciP01DORFJP (92% identity) | CCATC | M1.Che51209ORF1825P |
1826 | M | M2.Che12470ORF1910P (100% identity) | CCATC | M2.Che51209ORF1825P |
??? | R | Che12470ORF1910P (100% identity) | CCATC | Che51209ORF1825P |
1828 | RuvABC resolvasome, subunit RuvC | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
818 | argininosuccinate synthase | |||
819 | R | Che12470ORF855P (100% identity) | Che51209ORF820P | |
??? | M | M.Che12470ORF855P (100% identity) | M.Che51209ORF820P | |
822 | pyridoxine 5-phosphate synthase | |||
1766 | Na+/H+ antiporter family protein | |||
1767 | R | Che12470ORF1850P (100% identity) | Che51209ORF1768P | |
1768 | M | M.Che12470ORF1850P (100% identity) | M.Che51209ORF1768P | |
1769 | radical SAM superfamily enzyme (SPASM domain) |